Analysis of interatomic Contacts of Structural Units in PDB entry:
7T56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T56 entry

There are 4 chains in PDB entry 7T56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8GLU 722
C
 ASN 8GLY 24
B
 LYS 8GLU 722
D
 ASN 8GLY 24
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7T56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 34Right-handed alpha
Helix 2
AA2
A
38 47Right-handed alpha
Helix 3
AA3
A
54 66Right-handed alpha
Helix 4
AA4
A
124 132Right-handed alpha
Helix 5
AA5
A
154 159Right-handed alpha
Helix 6
AA6
A
160 163Right-handed 310
Helix 7
AA7
A
165 186Right-handed alpha
Helix 8
AA8
A
188 196Right-handed alpha
Helix 9
AA9
A
205 253Right-handed alpha
Helix 10
AB1
A
254 261Right-handed alpha
Helix 11
AB2
A
262 269Right-handed alpha
Helix 12
AB3
A
272 281Right-handed alpha
Helix 13
AB4
A
281 305Right-handed alpha
Helix 14
AB5
A
306 354Right-handed alpha
Helix 15
AB6
A
354 362Right-handed alpha
Helix 16
AB7
A
363 417Right-handed alpha
Helix 17
AB8
A
421 432Right-handed alpha
Helix 18
AB9
A
435 460Right-handed alpha
Helix 19
AC1
A
461 465Right-handed 310
Helix 20
AC2
A
525 533Right-handed alpha
Helix 21
AC3
A
554 559Right-handed alpha
Helix 22
AC4
A
575 581Right-handed alpha
Helix 23
AC5
A
588 599Right-handed alpha
Helix 24
AC6
A
601 606Right-handed alpha
Helix 25
AC7
A
624 639Right-handed alpha
Helix 26
AC8
A
654 667Right-handed alpha
Helix 27
AC9
A
707 711Right-handed 310
Helix 28
AD1
A
712 722Right-handed alpha
Helix 29
AD2
C
14 21Right-handed alpha
Helix 30
AD3
B
21 34Right-handed alpha
Helix 31
AD4
B
38 47Right-handed alpha
Helix 32
AD5
B
54 66Right-handed alpha
Helix 33
AD6
B
124 132Right-handed alpha
Helix 34
AD7
B
153 159Right-handed alpha
Helix 35
AD8
B
160 163Right-handed 310
Helix 36
AD9
B
165 186Right-handed alpha
Helix 37
AE1
B
188 196Right-handed alpha
Helix 38
AE2
B
205 253Right-handed alpha
Helix 39
AE3
B
254 261Right-handed alpha
Helix 40
AE4
B
262 269Right-handed alpha
Helix 41
AE5
B
272 281Right-handed alpha
Helix 42
AE6
B
281 305Right-handed alpha
Helix 43
AE7
B
305 354Right-handed alpha
Helix 44
AE8
B
354 362Right-handed alpha
Helix 45
AE9
B
363 417Right-handed alpha
Helix 46
AF1
B
421 432Right-handed alpha
Helix 47
AF2
B
435 460Right-handed alpha
Helix 48
AF3
B
461 465Right-handed 310
Helix 49
AF4
B
524 533Right-handed alpha
Helix 50
AF5
B
551 553Right-handed 310
Helix 51
AF6
B
554 561Right-handed alpha
Helix 52
AF7
B
575 581Right-handed alpha
Helix 53
AF8
B
588 600Right-handed alpha
Helix 54
AF9
B
601 606Right-handed alpha
Helix 55
AG1
B
617 621Right-handed 310
Helix 56
AG2
B
624 639Right-handed alpha
Helix 57
AG3
B
654 669Right-handed alpha
Helix 58
AG4
B
681 685Right-handed 310
Helix 59
AG5
B
703 710Right-handed alpha
Helix 60
AG6
B
713 722Right-handed alpha
Helix 61
AG7
D
14 21Right-handed alpha
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There are 8 sheets in PDB entry 7T56. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
136 141anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 93first strand
Strand 2
A
97 106anti-parallel
Strand 3
A
111 114anti-parallel
Strand 4
A
121 123anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 509first strand
Strand 2
A
486 492anti-parallel
Strand 3
A
540 545anti-parallel
Strand 4
A
548 549anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
562 564first strand
Strand 2
A
643 646parallel
Strand 3
A
673 679parallel
Strand 4
A
514 519parallel
Strand 5
A
689 693parallel
Strand 6
A
700 702anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
B
148 149parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 72first strand
Strand 2
B
136 141anti-parallel
Strand 3
B
87 93anti-parallel
Strand 4
B
97 103anti-parallel
Strand 5
B
111 114anti-parallel
Strand 6
B
121 123anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
506 509first strand
Strand 2
B
486 492anti-parallel
Strand 3
B
540 545anti-parallel
Strand 4
B
548 549anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
562 564first strand
Strand 2
B
643 646parallel
Strand 3
B
673 677parallel
Strand 4
B
515 519parallel
Strand 5
B
689 694parallel
Strand 6
B
697 702anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il