Analysis of interatomic Contacts of Structural Units in PDB entry:
7T57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T57 entry

There are 4 chains in PDB entry 7T57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8GLU 722
C
 ASN 8GLY 24
B
 LYS 8GLU 722
D
 ASN 8GLY 24
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7T57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 34Right-handed alpha
Helix 2
AA2
A
38 47Right-handed alpha
Helix 3
AA3
A
54 66Right-handed alpha
Helix 4
AA4
A
125 130Right-handed alpha
Helix 5
AA5
A
153 160Right-handed alpha
Helix 6
AA6
A
161 164Right-handed 310
Helix 7
AA7
A
165 196Right-handed alpha
Helix 8
AA8
A
202 213Right-handed alpha
Helix 9
AA9
A
214 251Right-handed alpha
Helix 10
AB1
A
254 261Right-handed alpha
Helix 11
AB2
A
263 281Right-handed alpha
Helix 12
AB3
A
281 305Right-handed alpha
Helix 13
AB4
A
306 354Right-handed alpha
Helix 14
AB5
A
354 362Right-handed alpha
Helix 15
AB6
A
363 418Right-handed alpha
Helix 16
AB7
A
422 460Right-handed alpha
Helix 17
AB8
A
461 465Right-handed 310
Helix 18
AB9
A
467 472Right-handed alpha
Helix 19
AC1
A
525 533Right-handed alpha
Helix 20
AC2
A
549 553Right-handed 310
Helix 21
AC3
A
554 561Right-handed alpha
Helix 22
AC4
A
576 581Right-handed alpha
Helix 23
AC5
A
588 599Right-handed alpha
Helix 24
AC6
A
601 606Right-handed alpha
Helix 25
AC7
A
617 621Right-handed 310
Helix 26
AC8
A
624 639Right-handed alpha
Helix 27
AC9
A
648 652Right-handed 310
Helix 28
AD1
A
656 667Right-handed alpha
Helix 29
AD2
A
703 711Right-handed alpha
Helix 30
AD3
A
712 722Right-handed alpha
Helix 31
AD4
C
14 19Right-handed alpha
Helix 32
AD5
B
20 34Right-handed alpha
Helix 33
AD6
B
38 47Right-handed alpha
Helix 34
AD7
B
54 66Right-handed alpha
Helix 35
AD8
B
125 132Right-handed alpha
Helix 36
AD9
B
154 159Right-handed alpha
Helix 37
AE1
B
160 164Right-handed 310
Helix 38
AE2
B
165 196Right-handed alpha
Helix 39
AE3
B
202 213Right-handed alpha
Helix 40
AE4
B
214 251Right-handed alpha
Helix 41
AE5
B
254 261Right-handed alpha
Helix 42
AE6
B
262 281Right-handed alpha
Helix 43
AE7
B
281 305Right-handed alpha
Helix 44
AE8
B
306 354Right-handed alpha
Helix 45
AE9
B
354 362Right-handed alpha
Helix 46
AF1
B
363 418Right-handed alpha
Helix 47
AF2
B
421 461Right-handed alpha
Helix 48
AF3
B
462 465Right-handed 310
Helix 49
AF4
B
467 472Right-handed alpha
Helix 50
AF5
B
525 534Right-handed alpha
Helix 51
AF6
B
554 561Right-handed alpha
Helix 52
AF7
B
576 581Right-handed alpha
Helix 53
AF8
B
589 599Right-handed alpha
Helix 54
AF9
B
603 608Right-handed 310
Helix 55
AG1
B
617 620Right-handed 310
Helix 56
AG2
B
624 639Right-handed alpha
Helix 57
AG3
B
648 652Right-handed 310
Helix 58
AG4
B
656 667Right-handed alpha
Helix 59
AG5
B
703 711Right-handed alpha
Helix 60
AG6
B
712 718Right-handed alpha
Helix 61
AG7
D
14 21Right-handed alpha
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There are 8 sheets in PDB entry 7T57. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
136 141anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
98 107anti-parallel
Strand 5
A
110 115anti-parallel
Strand 6
A
119 124anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 509first strand
Strand 2
A
486 492anti-parallel
Strand 3
A
540 545anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
562 565first strand
Strand 2
A
643 646parallel
Strand 3
A
673 678parallel
Strand 4
A
515 519parallel
Strand 5
A
689 694parallel
Strand 6
A
697 702anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 575first strand
Strand 2
A
615 616anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 72first strand
Strand 2
B
136 141anti-parallel
Strand 3
B
87 92anti-parallel
Strand 4
B
98 107anti-parallel
Strand 5
B
110 115anti-parallel
Strand 6
B
119 124anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
506 509first strand
Strand 2
B
486 492anti-parallel
Strand 3
B
540 545anti-parallel
Strand 4
B
548 549anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
562 564first strand
Strand 2
B
643 646parallel
Strand 3
B
673 678parallel
Strand 4
B
515 519parallel
Strand 5
B
689 694parallel
Strand 6
B
697 702anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
574 575first strand
Strand 2
B
615 616anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il