Analysis of interatomic Contacts of Structural Units in PDB entry:
7T6D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T6D entry

There are 4 chains in PDB entry 7T6D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 389
B
 MET 1LEU 389
C
 VAL 2GLY 222
D
 ARG 5TYR 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7T6D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 48Right-handed alpha
Helix 2
AA2
A
50 63Right-handed alpha
Helix 3
AA3
A
68 83Right-handed alpha
Helix 4
AA4
A
84 97Right-handed alpha
Helix 5
AA5
A
102 121Right-handed alpha
Helix 6
AA6
A
122 131Right-handed alpha
Helix 7
AA7
A
132 134Right-handed 310
Helix 8
AA8
A
136 138Right-handed 310
Helix 9
AA9
A
139 155Right-handed alpha
Helix 10
AB1
A
157 171Right-handed alpha
Helix 11
AB2
A
175 190Right-handed alpha
Helix 12
AB3
A
195 210Right-handed alpha
Helix 13
AB4
A
213 227Right-handed alpha
Helix 14
AB5
A
230 244Right-handed alpha
Helix 15
AB6
A
245 250Right-handed 310
Helix 16
AB7
A
251 263Right-handed alpha
Helix 17
AB8
A
265 277Right-handed alpha
Helix 18
AB9
A
281 297Right-handed alpha
Helix 19
AC1
A
297 312Right-handed alpha
Helix 20
AC2
A
314 329Right-handed alpha
Helix 21
AC3
A
332 352Right-handed alpha
Helix 22
AC4
B
4 27Right-handed alpha
Helix 23
AC5
B
37 48Right-handed alpha
Helix 24
AC6
B
50 62Right-handed alpha
Helix 25
AC7
B
69 82Right-handed alpha
Helix 26
AC8
B
84 97Right-handed alpha
Helix 27
AC9
B
102 121Right-handed alpha
Helix 28
AD1
B
122 131Right-handed alpha
Helix 29
AD2
B
132 134Right-handed 310
Helix 30
AD3
B
139 154Right-handed alpha
Helix 31
AD4
B
156 171Right-handed alpha
Helix 32
AD5
B
175 192Right-handed alpha
Helix 33
AD6
B
193 195Right-handed 310
Helix 34
AD7
B
200 210Right-handed alpha
Helix 35
AD8
B
213 228Right-handed alpha
Helix 36
AD9
B
230 239Right-handed alpha
Helix 37
AE1
B
239 244Right-handed alpha
Helix 38
AE2
B
247 250Right-handed 310
Helix 39
AE3
B
251 263Right-handed alpha
Helix 40
AE4
B
264 277Right-handed alpha
Helix 41
AE5
B
281 297Right-handed alpha
Helix 42
AE6
B
297 312Right-handed alpha
Helix 43
AE7
B
314 329Right-handed alpha
Helix 44
AE8
B
333 352Right-handed alpha
Helix 45
AE9
C
3 41Right-handed alpha
Helix 46
AF1
C
49 78Right-handed alpha
Helix 47
AF2
C
82 112Right-handed alpha
Helix 48
AF3
C
116 124Right-handed alpha
Helix 49
AF4
C
134 159Right-handed alpha
Helix 50
AF5
C
159 166Right-handed alpha
Helix 51
AF6
C
166 194Right-handed alpha
Helix 52
AF7
C
197 203Right-handed 310
Helix 53
AF8
C
215 221Right-handed alpha
Helix 54
AF9
D
6 41Right-handed alpha
Helix 55
AG1
D
49 78Right-handed alpha
Helix 56
AG2
D
82 112Right-handed alpha
Helix 57
AG3
D
116 124Right-handed alpha
Helix 58
AG4
D
134 159Right-handed alpha
Helix 59
AG5
D
159 166Right-handed alpha
Helix 60
AG6
D
166 194Right-handed alpha
Helix 61
AG7
D
197 203Right-handed 310
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There are 2 sheets in PDB entry 7T6D. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 364first strand
Strand 2
A
355 357anti-parallel
Strand 3
A
380 382anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
363 364first strand
Strand 2
B
355 357anti-parallel
Strand 3
B
380 382anti-parallel
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