Analysis of interatomic Contacts of Structural Units in PDB entry:
7T6F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7T6F entry

There are 4 chains in PDB entry 7T6F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 32	LYS 1153
C	PRO 255	LEU 291
D	PRO 255	LEU 291
B	PRO 32	LYS 1153

There are 84 helices in PDB entry 7T6F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	69	Right-handed alpha
Helix 2	AA2	A	74	76	Right-handed 310
Helix 3	AA3	A	151	168	Right-handed alpha
Helix 4	AA4	A	178	204	Right-handed alpha
Helix 5	AA5	A	216	221	Right-handed 310
Helix 6	AA6	A	222	231	Right-handed alpha
Helix 7	AA7	A	233	254	Right-handed alpha
Helix 8	AA8	A	254	260	Right-handed alpha
Helix 9	AA9	A	262	278	Right-handed alpha
Helix 10	AB1	A	368	370	Right-handed 310
Helix 11	AB2	A	398	417	Right-handed alpha
Helix 12	AB3	A	424	428	Right-handed 310
Helix 13	AB4	A	429	439	Right-handed alpha
Helix 14	AB5	A	445	456	Right-handed alpha
Helix 15	AB6	A	517	527	Right-handed alpha
Helix 16	AB7	A	557	562	Right-handed alpha
Helix 17	AB8	A	625	629	Right-handed 310
Helix 18	AB9	A	630	644	Right-handed alpha
Helix 19	AC1	A	673	681	Right-handed alpha
Helix 20	AC2	A	686	707	Right-handed alpha
Helix 21	AC3	A	715	717	Right-handed 310
Helix 22	AC4	A	742	746	Right-handed 310
Helix 23	AC5	A	747	753	Right-handed alpha
Helix 24	AC6	A	759	765	Right-handed alpha
Helix 25	AC7	A	766	769	Right-handed 310
Helix 26	AC8	A	770	772	Right-handed 310
Helix 27	AC9	A	773	787	Right-handed alpha
Helix 28	AD1	A	797	807	Right-handed alpha
Helix 29	AD2	A	816	827	Right-handed alpha
Helix 30	AD3	A	836	851	Right-handed alpha
Helix 31	AD4	A	870	872	Right-handed 310
Helix 32	AD5	A	916	929	Right-handed alpha
Helix 33	AD6	A	967	971	Right-handed 310
Helix 34	AD7	A	975	996	Right-handed alpha
Helix 35	AD8	A	1049	1054	Right-handed alpha
Helix 36	AD9	A	1060	1076	Right-handed alpha
Helix 37	AE1	A	1082	1087	Right-handed alpha
Helix 38	AE2	A	1099	1110	Right-handed alpha
Helix 39	AE3	A	1120	1131	Right-handed alpha
Helix 40	AE4	A	1140	1153	Right-handed alpha
Helix 41	AE5	C	255	259	Right-handed 310
Helix 42	AE6	C	263	267	Right-handed 310
Helix 43	AE7	D	255	259	Right-handed 310
Helix 44	AE8	D	263	267	Right-handed 310
Helix 45	AE9	B	57	69	Right-handed alpha
Helix 46	AF1	B	74	76	Right-handed 310
Helix 47	AF2	B	151	168	Right-handed alpha
Helix 48	AF3	B	178	204	Right-handed alpha
Helix 49	AF4	B	216	221	Right-handed 310
Helix 50	AF5	B	222	231	Right-handed alpha
Helix 51	AF6	B	233	254	Right-handed alpha
Helix 52	AF7	B	254	260	Right-handed alpha
Helix 53	AF8	B	262	278	Right-handed alpha
Helix 54	AF9	B	368	370	Right-handed 310
Helix 55	AG1	B	398	417	Right-handed alpha
Helix 56	AG2	B	424	428	Right-handed 310
Helix 57	AG3	B	429	439	Right-handed alpha
Helix 58	AG4	B	445	456	Right-handed alpha
Helix 59	AG5	B	517	527	Right-handed alpha
Helix 60	AG6	B	557	562	Right-handed alpha
Helix 61	AG7	B	625	629	Right-handed 310
Helix 62	AG8	B	630	644	Right-handed alpha
Helix 63	AG9	B	673	681	Right-handed alpha
Helix 64	AH1	B	686	707	Right-handed alpha
Helix 65	AH2	B	715	717	Right-handed 310
Helix 66	AH3	B	742	746	Right-handed 310
Helix 67	AH4	B	747	753	Right-handed alpha
Helix 68	AH5	B	759	765	Right-handed alpha
Helix 69	AH6	B	766	769	Right-handed 310
Helix 70	AH7	B	770	772	Right-handed 310
Helix 71	AH8	B	773	787	Right-handed alpha
Helix 72	AH9	B	797	807	Right-handed alpha
Helix 73	AI1	B	816	827	Right-handed alpha
Helix 74	AI2	B	836	851	Right-handed alpha
Helix 75	AI3	B	870	872	Right-handed 310
Helix 76	AI4	B	916	929	Right-handed alpha
Helix 77	AI5	B	967	971	Right-handed 310
Helix 78	AI6	B	975	996	Right-handed alpha
Helix 79	AI7	B	1049	1054	Right-handed alpha
Helix 80	AI8	B	1060	1076	Right-handed alpha
Helix 81	AI9	B	1082	1087	Right-handed alpha
Helix 82	AJ1	B	1099	1110	Right-handed alpha
Helix 83	AJ2	B	1120	1131	Right-handed alpha
Helix 84	AJ3	B	1140	1153	Right-handed alpha

There are 27 sheets in PDB entry 7T6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	35	39	anti-parallel
Strand 3	A	102	109	parallel
Strand 4	A	78	82	anti-parallel
Strand 5	A	87	88	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	94	97	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	128	first strand
Strand 2	A	555	556	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	288	first strand
Strand 2	A	312	317	anti-parallel
Strand 3	A	321	326	anti-parallel
Strand 4	A	364	367	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	294	first strand
Strand 2	A	391	395	anti-parallel
Strand 3	A	381	386	anti-parallel
Strand 4	A	372	378	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	479	first strand
Strand 2	A	462	464	anti-parallel
Strand 3	A	541	542	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	474	476	first strand
Strand 2	A	498	502	anti-parallel
Strand 3	A	505	508	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	537	first strand
Strand 2	A	529	532	anti-parallel
Strand 3	C	287	289	anti-parallel

Back to list of sheets
Back to top of page

There are 12 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	582	590	first strand
Strand 2	A	594	601	anti-parallel
Strand 3	A	616	623	anti-parallel
Strand 4	A	661	666	anti-parallel
Strand 5	A	652	658	anti-parallel
Strand 6	A	571	577	parallel
Strand 7	B	571	577	anti-parallel
Strand 8	B	652	658	parallel
Strand 9	B	661	666	anti-parallel
Strand 10	B	616	623	anti-parallel
Strand 11	B	594	601	anti-parallel
Strand 12	B	582	590	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	723	first strand
Strand 2	A	733	736	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	868	869	first strand
Strand 2	A	939	943	parallel
Strand 3	A	952	955	anti-parallel
Strand 4	A	902	908	anti-parallel
Strand 5	A	887	893	anti-parallel
Strand 6	A	874	882	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	998	999	first strand
Strand 2	A	1025	1026	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1009	1010	first strand
Strand 2	A	1016	1017	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1034	1035	first strand
Strand 2	A	1056	1057	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	289	first strand
Strand 2	B	529	532	anti-parallel
Strand 3	B	535	537	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	50	first strand
Strand 2	B	35	39	anti-parallel
Strand 3	B	102	109	parallel
Strand 4	B	78	82	anti-parallel
Strand 5	B	87	88	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	94	97	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	128	first strand
Strand 2	B	555	556	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	288	first strand
Strand 2	B	312	317	anti-parallel
Strand 3	B	321	326	anti-parallel
Strand 4	B	364	367	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	294	first strand
Strand 2	B	391	395	anti-parallel
Strand 3	B	381	386	anti-parallel
Strand 4	B	372	378	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	478	479	first strand
Strand 2	B	462	464	anti-parallel
Strand 3	B	541	542	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	474	476	first strand
Strand 2	B	498	502	anti-parallel
Strand 3	B	505	508	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	723	first strand
Strand 2	B	733	736	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	868	869	first strand
Strand 2	B	939	943	parallel
Strand 3	B	952	955	anti-parallel
Strand 4	B	902	908	anti-parallel
Strand 5	B	887	893	anti-parallel
Strand 6	B	874	882	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	998	999	first strand
Strand 2	B	1025	1026	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1009	1010	first strand
Strand 2	B	1016	1017	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1034	1035	first strand
Strand 2	B	1056	1057	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7T6F

Analysis of interatomic Contacts of Structural Units in PDB entry:
7T6F