Analysis of interatomic Contacts of Structural Units in PDB entry:
7T7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T7H entry

There are 2 chains in PDB entry 7T7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3LEU 214
B
 ILE 3SER 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7T7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 62Right-handed alpha
Helix 2
AA2
A
72 77Right-handed alpha
Helix 3
AA3
A
80 92Right-handed alpha
Helix 4
AA4
A
118 131Right-handed alpha
Helix 5
AA5
A
171 175Right-handed 310
Helix 6
AA6
A
191 193Right-handed 310
Helix 7
AA7
A
198 214Right-handed alpha
Helix 8
AA8
B
53 60Right-handed alpha
Helix 9
AA9
B
72 77Right-handed alpha
Helix 10
AB1
B
80 91Right-handed alpha
Helix 11
AB2
B
118 131Right-handed alpha
Helix 12
AB3
B
171 175Right-handed 310
Helix 13
AB4
B
191 194Right-handed 310
Helix 14
AB5
B
198 212Right-handed alpha
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There are 5 sheets in PDB entry 7T7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
16 23anti-parallel
Strand 3
A
144 151anti-parallel
Strand 4
A
157 167anti-parallel
Strand 5
A
32 39parallel
Strand 6
A
109 113anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
16 23anti-parallel
Strand 3
A
144 151anti-parallel
Strand 4
A
157 167anti-parallel
Strand 5
A
137 140anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
46 50anti-parallel
Strand 3
A
184 189anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 12first strand
Strand 2
B
16 23anti-parallel
Strand 3
B
137 151anti-parallel
Strand 4
B
157 167anti-parallel
Strand 5
B
32 39parallel
Strand 6
B
109 113anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
46 50anti-parallel
Strand 3
B
184 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il