Analysis of interatomic Contacts of Structural Units in PDB entry:
7T7R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7T7R entry

There are 3 chains in PDB entry 7T7R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 15	PRO 1146
B	GLU 15	PRO 1146
C	GLU 15	PRO 1146

There are138 helices in PDB entry 7T7R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	31	Right-handed alpha
Helix 2	AA2	A	32	36	Right-handed 310
Helix 3	AA3	A	78	82	Right-handed alpha
Helix 4	AA4	A	87	100	Right-handed alpha
Helix 5	AA5	A	102	123	Right-handed alpha
Helix 6	AA6	A	123	134	Right-handed alpha
Helix 7	AA7	A	137	154	Right-handed alpha
Helix 8	AA8	A	233	240	Right-handed alpha
Helix 9	AA9	A	258	260	Right-handed 310
Helix 10	AB1	A	299	317	Right-handed alpha
Helix 11	AB2	A	331	337	Right-handed 310
Helix 12	AB3	A	340	354	Right-handed alpha
Helix 13	AB4	A	357	371	Right-handed alpha
Helix 14	AB5	A	377	395	Right-handed alpha
Helix 15	AB6	A	403	410	Right-handed alpha
Helix 16	AB7	A	414	435	Right-handed alpha
Helix 17	AB8	A	435	440	Right-handed alpha
Helix 18	AB9	A	444	468	Right-handed alpha
Helix 19	AC1	A	476	499	Right-handed alpha
Helix 20	AC2	A	499	509	Right-handed alpha
Helix 21	AC3	A	511	515	Right-handed 310
Helix 22	AC4	A	519	524	Right-handed alpha
Helix 23	AC5	A	530	550	Right-handed alpha
Helix 24	AC6	A	550	555	Right-handed alpha
Helix 25	AC7	A	563	591	Right-handed alpha
Helix 26	AC8	A	594	613	Right-handed alpha
Helix 27	AC9	A	616	621	Right-handed alpha
Helix 28	AD1	A	626	659	Right-handed alpha
Helix 29	AD2	A	671	690	Right-handed alpha
Helix 30	AD3	A	695	729	Right-handed alpha
Helix 31	AD4	A	734	758	Right-handed alpha
Helix 32	AD5	A	759	763	Right-handed 310
Helix 33	AD6	A	764	809	Right-handed alpha
Helix 34	AD7	A	813	817	Right-handed 310
Helix 35	AD8	A	824	851	Right-handed alpha
Helix 36	AD9	A	852	875	Right-handed alpha
Helix 37	AE1	A	881	886	Right-handed alpha
Helix 38	AE2	A	898	918	Right-handed alpha
Helix 39	AE3	A	919	921	Right-handed 310
Helix 40	AE4	A	924	930	Right-handed alpha
Helix 41	AE5	A	931	946	Right-handed alpha
Helix 42	AE6	A	947	959	Right-handed alpha
Helix 43	AE7	A	1054	1057	Right-handed 310
Helix 44	AE8	A	1083	1090	Right-handed alpha
Helix 45	AE9	A	1105	1118	Right-handed alpha
Helix 46	AF1	A	1121	1132	Right-handed alpha
Helix 47	AF2	B	16	31	Right-handed alpha
Helix 48	AF3	B	32	36	Right-handed 310
Helix 49	AF4	B	78	82	Right-handed alpha
Helix 50	AF5	B	87	100	Right-handed alpha
Helix 51	AF6	B	102	123	Right-handed alpha
Helix 52	AF7	B	123	134	Right-handed alpha
Helix 53	AF8	B	137	154	Right-handed alpha
Helix 54	AF9	B	233	240	Right-handed alpha
Helix 55	AG1	B	258	260	Right-handed 310
Helix 56	AG2	B	299	317	Right-handed alpha
Helix 57	AG3	B	331	337	Right-handed 310
Helix 58	AG4	B	340	354	Right-handed alpha
Helix 59	AG5	B	357	371	Right-handed alpha
Helix 60	AG6	B	377	395	Right-handed alpha
Helix 61	AG7	B	403	410	Right-handed alpha
Helix 62	AG8	B	414	435	Right-handed alpha
Helix 63	AG9	B	435	440	Right-handed alpha
Helix 64	AH1	B	444	468	Right-handed alpha
Helix 65	AH2	B	476	499	Right-handed alpha
Helix 66	AH3	B	499	509	Right-handed alpha
Helix 67	AH4	B	511	515	Right-handed 310
Helix 68	AH5	B	519	524	Right-handed alpha
Helix 69	AH6	B	530	550	Right-handed alpha
Helix 70	AH7	B	550	555	Right-handed alpha
Helix 71	AH8	B	563	591	Right-handed alpha
Helix 72	AH9	B	594	613	Right-handed alpha
Helix 73	AI1	B	616	621	Right-handed alpha
Helix 74	AI2	B	626	659	Right-handed alpha
Helix 75	AI3	B	671	690	Right-handed alpha
Helix 76	AI4	B	695	729	Right-handed alpha
Helix 77	AI5	B	734	758	Right-handed alpha
Helix 78	AI6	B	759	763	Right-handed 310
Helix 79	AI7	B	764	809	Right-handed alpha
Helix 80	AI8	B	813	817	Right-handed 310
Helix 81	AI9	B	824	851	Right-handed alpha
Helix 82	AJ1	B	852	875	Right-handed alpha
Helix 83	AJ2	B	881	886	Right-handed alpha
Helix 84	AJ3	B	898	918	Right-handed alpha
Helix 85	AJ4	B	919	921	Right-handed 310
Helix 86	AJ5	B	924	930	Right-handed alpha
Helix 87	AJ6	B	931	946	Right-handed alpha
Helix 88	AJ7	B	947	959	Right-handed alpha
Helix 89	AJ8	B	1054	1057	Right-handed 310
Helix 90	AJ9	B	1083	1090	Right-handed alpha
Helix 91	AK1	B	1105	1118	Right-handed alpha
Helix 92	AK2	B	1121	1132	Right-handed alpha
Helix 93	AK3	C	16	31	Right-handed alpha
Helix 94	AK4	C	32	36	Right-handed 310
Helix 95	AK5	C	78	82	Right-handed alpha
Helix 96	AK6	C	87	100	Right-handed alpha
Helix 97	AK7	C	102	123	Right-handed alpha
Helix 98	AK8	C	123	134	Right-handed alpha
Helix 99	AK9	C	137	154	Right-handed alpha
Helix 100	AL1	C	233	240	Right-handed alpha
Helix 101	AL2	C	258	260	Right-handed 310
Helix 102	AL3	C	299	317	Right-handed alpha
Helix 103	AL4	C	331	337	Right-handed 310
Helix 104	AL5	C	340	354	Right-handed alpha
Helix 105	AL6	C	357	371	Right-handed alpha
Helix 106	AL7	C	377	395	Right-handed alpha
Helix 107	AL8	C	403	410	Right-handed alpha
Helix 108	AL9	C	414	435	Right-handed alpha
Helix 109	AM1	C	435	440	Right-handed alpha
Helix 110	AM2	C	444	468	Right-handed alpha
Helix 111	AM3	C	476	499	Right-handed alpha
Helix 112	AM4	C	499	509	Right-handed alpha
Helix 113	AM5	C	511	515	Right-handed 310
Helix 114	AM6	C	519	524	Right-handed alpha
Helix 115	AM7	C	530	550	Right-handed alpha
Helix 116	AM8	C	550	555	Right-handed alpha
Helix 117	AM9	C	563	591	Right-handed alpha
Helix 118	AN1	C	594	613	Right-handed alpha
Helix 119	AN2	C	616	621	Right-handed alpha
Helix 120	AN3	C	626	659	Right-handed alpha
Helix 121	AN4	C	671	690	Right-handed alpha
Helix 122	AN5	C	695	729	Right-handed alpha
Helix 123	AN6	C	734	758	Right-handed alpha
Helix 124	AN7	C	759	763	Right-handed 310
Helix 125	AN8	C	764	809	Right-handed alpha
Helix 126	AN9	C	813	817	Right-handed 310
Helix 127	AO1	C	824	851	Right-handed alpha
Helix 128	AO2	C	852	875	Right-handed alpha
Helix 129	AO3	C	881	886	Right-handed alpha
Helix 130	AO4	C	898	918	Right-handed alpha
Helix 131	AO5	C	919	921	Right-handed 310
Helix 132	AO6	C	924	930	Right-handed alpha
Helix 133	AO7	C	931	946	Right-handed alpha
Helix 134	AO8	C	947	959	Right-handed alpha
Helix 135	AO9	C	1054	1057	Right-handed 310
Helix 136	AP1	C	1083	1090	Right-handed alpha
Helix 137	AP2	C	1105	1118	Right-handed alpha
Helix 138	AP3	C	1121	1132	Right-handed alpha

There are 15 sheets in PDB entry 7T7R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	51	first strand
Strand 2	A	58	69	anti-parallel
Strand 3	A	75	77	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	215	first strand
Strand 2	A	162	171	anti-parallel
Strand 3	A	282	289	anti-parallel
Strand 4	A	263	269	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	196	first strand
Strand 2	A	184	190	anti-parallel
Strand 3	A	222	229	anti-parallel
Strand 4	A	249	256	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1040	1048	first strand
Strand 2	A	988	998	anti-parallel
Strand 3	A	972	981	anti-parallel
Strand 4	A	1091	1097	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1027	1029	first strand
Strand 2	A	1010	1017	anti-parallel
Strand 3	A	1059	1066	anti-parallel
Strand 4	A	1074	1082	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	51	first strand
Strand 2	B	58	69	anti-parallel
Strand 3	B	75	77	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	215	first strand
Strand 2	B	162	171	anti-parallel
Strand 3	B	282	289	anti-parallel
Strand 4	B	263	269	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	196	first strand
Strand 2	B	184	190	anti-parallel
Strand 3	B	222	229	anti-parallel
Strand 4	B	249	256	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1040	1048	first strand
Strand 2	B	988	998	anti-parallel
Strand 3	B	972	981	anti-parallel
Strand 4	B	1091	1097	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1027	1029	first strand
Strand 2	B	1010	1017	anti-parallel
Strand 3	B	1059	1066	anti-parallel
Strand 4	B	1074	1082	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	51	first strand
Strand 2	C	58	69	anti-parallel
Strand 3	C	75	77	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	215	first strand
Strand 2	C	162	171	anti-parallel
Strand 3	C	282	289	anti-parallel
Strand 4	C	263	269	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	196	first strand
Strand 2	C	184	190	anti-parallel
Strand 3	C	222	229	anti-parallel
Strand 4	C	249	256	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1040	1048	first strand
Strand 2	C	988	998	anti-parallel
Strand 3	C	972	981	anti-parallel
Strand 4	C	1091	1097	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1027	1029	first strand
Strand 2	C	1010	1017	anti-parallel
Strand 3	C	1059	1066	anti-parallel
Strand 4	C	1074	1082	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7T7R

Analysis of interatomic Contacts of Structural Units in PDB entry:
7T7R