Analysis of interatomic Contacts of Structural Units in PDB entry:
7T8T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7T8T entry

There is 1 chain in PDB entry 7T8T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 20	LYS 1215

There are 35 helices in PDB entry 7T8T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	32	Right-handed alpha
Helix 2	AA2	A	87	95	Right-handed alpha
Helix 3	AA3	A	126	146	Right-handed alpha
Helix 4	AA4	A	148	163	Right-handed alpha
Helix 5	AA5	A	173	183	Right-handed alpha
Helix 6	AA6	A	209	224	Right-handed alpha
Helix 7	AA7	A	250	261	Right-handed alpha
Helix 8	AA8	A	264	268	Right-handed 310
Helix 9	AA9	A	269	282	Right-handed alpha
Helix 10	AB1	A	295	304	Right-handed alpha
Helix 11	AB2	A	305	308	Right-handed 310
Helix 12	AB3	A	311	316	Right-handed 310
Helix 13	AB4	A	318	322	Right-handed 310
Helix 14	AB5	A	325	329	Right-handed 310
Helix 15	AB6	A	349	360	Right-handed alpha
Helix 16	AB7	A	390	400	Right-handed alpha
Helix 17	AB8	A	419	434	Right-handed alpha
Helix 18	AB9	A	435	437	Right-handed 310
Helix 19	AC1	A	451	456	Right-handed 310
Helix 20	AC2	A	544	548	Right-handed alpha
Helix 21	AC3	A	558	568	Right-handed alpha
Helix 22	AC4	A	569	574	Right-handed alpha
Helix 23	AC5	A	631	639	Right-handed alpha
Helix 24	AC6	A	674	685	Right-handed alpha
Helix 25	AC7	A	733	743	Right-handed alpha
Helix 26	AC8	A	757	763	Right-handed alpha
Helix 27	AC9	A	879	881	Right-handed 310
Helix 28	AD1	A	915	931	Right-handed alpha
Helix 29	AD2	A	950	957	Right-handed alpha
Helix 30	AD3	A	985	990	Right-handed alpha
Helix 31	AD4	A	993	1005	Right-handed alpha
Helix 32	AD5	A	1025	1032	Right-handed alpha
Helix 33	AD6	A	1044	1054	Right-handed alpha
Helix 34	AD7	A	1067	1071	Right-handed 310
Helix 35	AD8	A	1078	1083	Right-handed 310

There are 11 sheets in PDB entry 7T8T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	74	first strand
Strand 2	A	59	63	anti-parallel
Strand 3	A	47	54	anti-parallel
Strand 4	A	33	38	anti-parallel
Strand 5	A	118	123	anti-parallel
Strand 6	A	106	111	anti-parallel
Strand 7	A	78	83	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	249	first strand
Strand 2	A	293	294	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	378	first strand
Strand 2	A	363	369	anti-parallel
Strand 3	A	409	415	parallel
Strand 4	A	459	462	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	491	497	first strand
Strand 2	A	506	512	anti-parallel
Strand 3	A	516	520	anti-parallel
Strand 4	A	872	877	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	583	587	first strand
Strand 2	A	595	600	anti-parallel
Strand 3	A	605	607	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	610	611	first strand
Strand 2	A	622	623	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	723	725	first strand
Strand 2	A	711	720	anti-parallel
Strand 3	A	701	708	anti-parallel
Strand 4	A	690	695	anti-parallel
Strand 5	A	754	755	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	882	883	first strand
Strand 2	A	899	900	anti-parallel
Strand 3	A	908	909	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	982	983	first strand
Strand 2	A	1010	1011	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1145	1149	first strand
Strand 2	A	1088	1098	anti-parallel
Strand 3	A	1204	1211	anti-parallel
Strand 4	A	1186	1191	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1124	1127	first strand
Strand 2	A	1110	1117	anti-parallel
Strand 3	A	1156	1164	anti-parallel
Strand 4	A	1170	1179	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7T8T

Analysis of interatomic Contacts of Structural Units in PDB entry:
7T8T