Analysis of interatomic Contacts of Structural Units in PDB entry:
7T96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7T96 entry

There are 5 chains in PDB entry 7T96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 22CYS 457
B
 THR 4TYR 354
C
 GLU 3ASN 340
D
 ALA 7ARG 62
E
 ASP 1LYS 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 7T96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 50Right-handed alpha
Helix 2
AA2
A
51 55Right-handed 310
Helix 3
AA3
A
56 73Right-handed alpha
Helix 4
AA4
A
74 85Right-handed alpha
Helix 5
AA5
A
91 94Right-handed 310
Helix 6
AA6
A
95 127Right-handed alpha
Helix 7
AA7
A
130 135Right-handed alpha
Helix 8
AA8
A
136 167Right-handed alpha
Helix 9
AA9
A
183 212Right-handed alpha
Helix 10
AB1
A
380 411Right-handed alpha
Helix 11
AB2
A
420 442Right-handed alpha
Helix 12
AB3
A
446 457Right-handed alpha
Helix 13
AB4
B
8 31Right-handed alpha
Helix 14
AB5
B
45 52Right-handed alpha
Helix 15
AB6
B
208 217Right-handed 310
Helix 16
AB7
B
242 256Right-handed alpha
Helix 17
AB8
B
273 280Right-handed alpha
Helix 18
AB9
B
283 287Right-handed 310
Helix 19
AC1
B
296 310Right-handed alpha
Helix 20
AC2
B
331 351Right-handed alpha
Helix 21
AC3
C
4 26Right-handed alpha
Helix 22
AC4
C
29 34Right-handed alpha
Helix 23
AC5
D
8 23Right-handed alpha
Helix 24
AC6
D
29 44Right-handed alpha
Helix 25
AC7
E
28 32Right-handed 310
Helix 26
AC8
E
87 91Right-handed 310
Back to top of page

There are 12 sheets in PDB entry 7T96. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 191first strand
Strand 2
B
196 201anti-parallel
Strand 3
B
33 39parallel
Strand 4
B
221 227parallel
Strand 5
B
264 270parallel
Strand 6
B
319 322parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 51first strand
Strand 2
C
336 339anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
88 94anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 105first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
121 125anti-parallel
Strand 4
C
135 139anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 153first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
165 168anti-parallel
Strand 4
C
178 181anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
191 192first strand
Strand 2
C
199 201anti-parallel
Strand 3
C
208 210anti-parallel
Strand 4
C
220 222anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
250 254anti-parallel
Strand 4
C
260 264anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 278first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
293 298anti-parallel
Strand 4
C
304 309anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
17 25anti-parallel
Strand 3
E
78 84anti-parallel
Strand 4
E
69 73anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
115 119parallel
Strand 3
E
92 98anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
45 51anti-parallel
Strand 6
E
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
146 149first strand
Strand 2
E
243 247parallel
Strand 3
E
226 231anti-parallel
Strand 4
E
174 179anti-parallel
Strand 5
E
186 190anti-parallel
Strand 6
E
194 195anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
154 160first strand
Strand 2
E
211 217anti-parallel
Strand 3
E
204 208anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il