Analysis of interatomic Contacts of Structural Units in PDB entry:
7T9K

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7T9K entry

There are 5 chains in PDB entry 7T9K (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	SER 1147
B	GLN 14	SER 1147
C	GLN 14	SER 1147
D	SER 19	TYR 613
E	SER 19	TYR 613

There are121 helices in PDB entry 7T9K. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	338	343	Right-handed alpha
Helix 3	AA3	A	365	370	Right-handed alpha
Helix 4	AA4	A	384	389	Right-handed 310
Helix 5	AA5	A	416	422	Right-handed alpha
Helix 6	AA6	A	616	620	Right-handed 310
Helix 7	AA7	A	737	744	Right-handed alpha
Helix 8	AA8	A	746	754	Right-handed alpha
Helix 9	AA9	A	755	757	Right-handed 310
Helix 10	AB1	A	758	783	Right-handed alpha
Helix 11	AB2	A	816	826	Right-handed alpha
Helix 12	AB3	A	866	884	Right-handed alpha
Helix 13	AB4	A	897	909	Right-handed alpha
Helix 14	AB5	A	912	919	Right-handed alpha
Helix 15	AB6	A	919	941	Right-handed alpha
Helix 16	AB7	A	945	965	Right-handed alpha
Helix 17	AB8	A	966	968	Right-handed 310
Helix 18	AB9	A	976	984	Right-handed alpha
Helix 19	AC1	A	985	1032	Right-handed alpha
Helix 20	AC2	A	1141	1147	Right-handed alpha
Helix 21	AC3	B	294	304	Right-handed alpha
Helix 22	AC4	B	337	343	Right-handed alpha
Helix 23	AC5	B	365	370	Right-handed alpha
Helix 24	AC6	B	384	388	Right-handed 310
Helix 25	AC7	B	416	422	Right-handed alpha
Helix 26	AC8	B	438	443	Right-handed alpha
Helix 27	AC9	B	616	620	Right-handed 310
Helix 28	AD1	B	737	744	Right-handed alpha
Helix 29	AD2	B	746	754	Right-handed alpha
Helix 30	AD3	B	755	757	Right-handed 310
Helix 31	AD4	B	758	783	Right-handed alpha
Helix 32	AD5	B	816	826	Right-handed alpha
Helix 33	AD6	B	866	884	Right-handed alpha
Helix 34	AD7	B	897	909	Right-handed alpha
Helix 35	AD8	B	912	919	Right-handed alpha
Helix 36	AD9	B	919	941	Right-handed alpha
Helix 37	AE1	B	945	965	Right-handed alpha
Helix 38	AE2	B	966	968	Right-handed 310
Helix 39	AE3	B	976	984	Right-handed alpha
Helix 40	AE4	B	985	1032	Right-handed alpha
Helix 41	AE5	B	1141	1147	Right-handed alpha
Helix 42	AE6	C	294	304	Right-handed alpha
Helix 43	AE7	C	616	620	Right-handed 310
Helix 44	AE8	C	737	744	Right-handed alpha
Helix 45	AE9	C	746	754	Right-handed alpha
Helix 46	AF1	C	755	757	Right-handed 310
Helix 47	AF2	C	758	783	Right-handed alpha
Helix 48	AF3	C	816	826	Right-handed alpha
Helix 49	AF4	C	866	884	Right-handed alpha
Helix 50	AF5	C	897	909	Right-handed alpha
Helix 51	AF6	C	912	919	Right-handed alpha
Helix 52	AF7	C	919	941	Right-handed alpha
Helix 53	AF8	C	945	965	Right-handed alpha
Helix 54	AF9	C	966	968	Right-handed 310
Helix 55	AG1	C	976	984	Right-handed alpha
Helix 56	AG2	C	985	1032	Right-handed alpha
Helix 57	AG3	C	1141	1147	Right-handed alpha
Helix 58	AG4	D	20	53	Right-handed alpha
Helix 59	AG5	D	55	81	Right-handed alpha
Helix 60	AG6	D	90	101	Right-handed alpha
Helix 61	AG7	D	103	108	Right-handed 310
Helix 62	AG8	D	109	129	Right-handed alpha
Helix 63	AG9	D	147	155	Right-handed alpha
Helix 64	AH1	D	157	194	Right-handed alpha
Helix 65	AH2	D	198	205	Right-handed alpha
Helix 66	AH3	D	206	208	Right-handed 310
Helix 67	AH4	D	221	252	Right-handed alpha
Helix 68	AH5	D	265	267	Right-handed 310
Helix 69	AH6	D	275	279	Right-handed 310
Helix 70	AH7	D	293	300	Right-handed alpha
Helix 71	AH8	D	303	319	Right-handed alpha
Helix 72	AH9	D	324	331	Right-handed alpha
Helix 73	AI1	D	365	385	Right-handed alpha
Helix 74	AI2	D	386	388	Right-handed 310
Helix 75	AI3	D	389	393	Right-handed 310
Helix 76	AI4	D	397	413	Right-handed alpha
Helix 77	AI5	D	414	421	Right-handed alpha
Helix 78	AI6	D	431	447	Right-handed alpha
Helix 79	AI7	D	448	466	Right-handed alpha
Helix 80	AI8	D	469	471	Right-handed 310
Helix 81	AI9	D	472	484	Right-handed alpha
Helix 82	AJ1	D	499	502	Right-handed 310
Helix 83	AJ2	D	503	508	Right-handed alpha
Helix 84	AJ3	D	512	533	Right-handed alpha
Helix 85	AJ4	D	538	542	Right-handed 310
Helix 86	AJ5	D	547	559	Right-handed alpha
Helix 87	AJ6	D	565	574	Right-handed alpha
Helix 88	AJ7	D	581	588	Right-handed alpha
Helix 89	AJ8	D	588	599	Right-handed alpha
Helix 90	AJ9	E	20	53	Right-handed alpha
Helix 91	AK1	E	55	81	Right-handed alpha
Helix 92	AK2	E	90	101	Right-handed alpha
Helix 93	AK3	E	103	108	Right-handed 310
Helix 94	AK4	E	109	129	Right-handed alpha
Helix 95	AK5	E	147	155	Right-handed alpha
Helix 96	AK6	E	157	194	Right-handed alpha
Helix 97	AK7	E	198	205	Right-handed alpha
Helix 98	AK8	E	206	208	Right-handed 310
Helix 99	AK9	E	221	252	Right-handed alpha
Helix 100	AL1	E	265	267	Right-handed 310
Helix 101	AL2	E	275	279	Right-handed 310
Helix 102	AL3	E	293	300	Right-handed alpha
Helix 103	AL4	E	303	319	Right-handed alpha
Helix 104	AL5	E	324	331	Right-handed alpha
Helix 105	AL6	E	365	385	Right-handed alpha
Helix 106	AL7	E	386	388	Right-handed 310
Helix 107	AL8	E	389	393	Right-handed 310
Helix 108	AL9	E	397	413	Right-handed alpha
Helix 109	AM1	E	414	421	Right-handed alpha
Helix 110	AM2	E	431	447	Right-handed alpha
Helix 111	AM3	E	448	466	Right-handed alpha
Helix 112	AM4	E	469	471	Right-handed 310
Helix 113	AM5	E	472	484	Right-handed alpha
Helix 114	AM6	E	499	502	Right-handed 310
Helix 115	AM7	E	503	508	Right-handed alpha
Helix 116	AM8	E	512	533	Right-handed alpha
Helix 117	AM9	E	538	542	Right-handed 310
Helix 118	AN1	E	547	559	Right-handed alpha
Helix 119	AN2	E	565	574	Right-handed alpha
Helix 120	AN3	E	581	588	Right-handed alpha
Helix 121	AN4	E	588	599	Right-handed alpha

There are 44 sheets in PDB entry 7T9K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	67	anti-parallel
Strand 3	A	263	269	anti-parallel
Strand 4	A	89	96	anti-parallel
Strand 5	A	188	197	anti-parallel
Strand 6	A	200	209	anti-parallel
Strand 7	A	224	229	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	C	565	567	parallel
Strand 3	C	573	577	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	546	554	anti-parallel
Strand 6	C	538	543	anti-parallel
Strand 7	C	325	328	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	241	anti-parallel
Strand 3	A	103	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	141	anti-parallel
Strand 6	A	157	172	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	318	first strand
Strand 2	A	593	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	644	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel
Strand 7	B	42	44	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	402	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	379	380	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	693	696	parallel
Strand 3	A	670	673	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	704	first strand
Strand 2	B	787	790	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1102	1105	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	736	first strand
Strand 2	A	858	861	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	790	first strand
Strand 2	C	701	704	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	67	anti-parallel
Strand 3	B	263	269	anti-parallel
Strand 4	B	89	96	anti-parallel
Strand 5	B	188	197	anti-parallel
Strand 6	B	200	209	anti-parallel
Strand 7	B	224	230	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	85	first strand
Strand 2	B	237	243	anti-parallel
Strand 3	B	103	107	anti-parallel
Strand 4	B	116	121	anti-parallel
Strand 5	B	126	141	anti-parallel
Strand 6	B	157	172	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	85	first strand
Strand 2	B	237	243	anti-parallel
Strand 3	B	126	141	parallel
Strand 4	B	157	172	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	644	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	328	first strand
Strand 2	B	538	543	parallel
Strand 3	B	546	554	anti-parallel
Strand 4	B	584	589	anti-parallel
Strand 5	B	573	577	anti-parallel
Strand 6	B	565	567	anti-parallel
Strand 7	C	42	44	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	394	402	anti-parallel
Strand 3	B	508	516	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	379	380	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	454	first strand
Strand 2	B	492	497	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	488	489	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	693	696	parallel
Strand 3	B	670	673	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	704	first strand
Strand 2	C	787	790	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1078	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel
Strand 5	B	1113	1114	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	67	anti-parallel
Strand 3	C	263	269	anti-parallel
Strand 4	C	89	96	anti-parallel
Strand 5	C	188	197	anti-parallel
Strand 6	C	200	209	anti-parallel
Strand 7	C	224	230	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	85	first strand
Strand 2	C	237	241	anti-parallel
Strand 3	C	103	107	anti-parallel
Strand 4	C	116	121	anti-parallel
Strand 5	C	126	142	anti-parallel
Strand 6	C	156	172	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	644	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	693	696	parallel
Strand 3	C	670	673	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1078	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1078	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	352	first strand
Strand 2	D	355	359	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	262	263	first strand
Strand 2	E	487	488	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	352	first strand
Strand 2	E	355	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7T9K

Analysis of interatomic Contacts of Structural Units in PDB entry:
7T9K