Analysis of interatomic Contacts of Structural Units in PDB entry:
7TAD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TAD entry

There are 4 chains in PDB entry 7TAD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 41ARG 404
B
 PRO 41ARG 404
C
 ASN 164ALA 378
D
 ASN 164ALA 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 7TAD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 59Right-handed alpha
Helix 2
AA2
A
60 64Right-handed 310
Helix 3
AA3
A
80 88Right-handed alpha
Helix 4
AA4
A
88 99Right-handed alpha
Helix 5
AA5
A
114 118Right-handed alpha
Helix 6
AA6
A
124 138Right-handed alpha
Helix 7
AA7
A
160 177Right-handed alpha
Helix 8
AA8
A
179 195Right-handed alpha
Helix 9
AA9
A
198 212Right-handed alpha
Helix 10
AB1
A
216 229Right-handed alpha
Helix 11
AB2
A
233 241Right-handed alpha
Helix 12
AB3
A
242 256Right-handed alpha
Helix 13
AB4
A
264 276Right-handed alpha
Helix 14
AB5
A
278 289Right-handed alpha
Helix 15
AB6
A
292 297Right-handed alpha
Helix 16
AB7
A
297 305Right-handed alpha
Helix 17
AB8
A
307 316Right-handed alpha
Helix 18
AB9
A
331 340Right-handed alpha
Helix 19
AC1
A
341 352Right-handed alpha
Helix 20
AC2
A
364 373Right-handed alpha
Helix 21
AC3
A
374 379Right-handed 310
Helix 22
AC4
A
389 404Right-handed alpha
Helix 23
AC5
B
42 59Right-handed alpha
Helix 24
AC6
B
60 64Right-handed 310
Helix 25
AC7
B
80 88Right-handed alpha
Helix 26
AC8
B
88 99Right-handed alpha
Helix 27
AC9
B
114 118Right-handed alpha
Helix 28
AD1
B
124 138Right-handed alpha
Helix 29
AD2
B
160 177Right-handed alpha
Helix 30
AD3
B
179 195Right-handed alpha
Helix 31
AD4
B
198 212Right-handed alpha
Helix 32
AD5
B
213 215Right-handed 310
Helix 33
AD6
B
216 230Right-handed alpha
Helix 34
AD7
B
233 241Right-handed alpha
Helix 35
AD8
B
242 256Right-handed alpha
Helix 36
AD9
B
264 276Right-handed alpha
Helix 37
AE1
B
278 287Right-handed alpha
Helix 38
AE2
B
292 297Right-handed alpha
Helix 39
AE3
B
297 306Right-handed alpha
Helix 40
AE4
B
307 317Right-handed alpha
Helix 41
AE5
B
331 340Right-handed alpha
Helix 42
AE6
B
341 351Right-handed alpha
Helix 43
AE7
B
364 373Right-handed alpha
Helix 44
AE8
B
374 379Right-handed 310
Helix 45
AE9
B
389 403Right-handed alpha
Helix 46
AF1
C
165 194Right-handed alpha
Helix 47
AF2
C
197 226Right-handed alpha
Helix 48
AF3
C
226 233Right-handed alpha
Helix 49
AF4
C
239 244Right-handed 310
Helix 50
AF5
C
250 259Right-handed alpha
Helix 51
AF6
C
260 262Right-handed 310
Helix 52
AF7
C
266 306Right-handed alpha
Helix 53
AF8
C
316 350Right-handed alpha
Helix 54
AF9
C
351 377Right-handed alpha
Helix 55
AG1
D
165 194Right-handed alpha
Helix 56
AG2
D
197 226Right-handed alpha
Helix 57
AG3
D
226 233Right-handed alpha
Helix 58
AG4
D
239 243Right-handed 310
Helix 59
AG5
D
250 263Right-handed alpha
Helix 60
AG6
D
266 307Right-handed alpha
Helix 61
AG7
D
317 350Right-handed alpha
Helix 62
AG8
D
351 378Right-handed alpha
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There are 2 sheets in PDB entry 7TAD. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
67 70anti-parallel
Strand 3
A
111 113parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 79first strand
Strand 2
B
67 70anti-parallel
Strand 3
B
111 113parallel
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