Analysis of interatomic Contacts of Structural Units in PDB entry:
7TAV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TAV entry

There are 6 chains in PDB entry 7TAV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 1	ASN 230
B	GLN 1	ALA 229
C	GLN 1	ASN 230
D	GLN 1	ASN 230
E	GLN 1	ALA 229
F	THR 2	LYS 184

There are 65 helices in PDB entry 7TAV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	28	Right-handed alpha
Helix 2	AA2	A	39	48	Right-handed alpha
Helix 3	AA3	A	60	70	Right-handed alpha
Helix 4	AA4	A	99	107	Right-handed alpha
Helix 5	AA5	A	118	131	Right-handed alpha
Helix 6	AA6	A	137	139	Right-handed 310
Helix 7	AA7	A	146	156	Right-handed alpha
Helix 8	AA8	A	166	171	Right-handed alpha
Helix 9	AA9	A	182	186	Right-handed 310
Helix 10	AB1	A	201	212	Right-handed alpha
Helix 11	AB2	A	214	224	Right-handed alpha
Helix 12	AB3	B	13	28	Right-handed alpha
Helix 13	AB4	B	39	50	Right-handed alpha
Helix 14	AB5	B	60	70	Right-handed alpha
Helix 15	AB6	B	99	106	Right-handed alpha
Helix 16	AB7	B	118	131	Right-handed alpha
Helix 17	AB8	B	134	139	Right-handed 310
Helix 18	AB9	B	146	156	Right-handed alpha
Helix 19	AC1	B	166	171	Right-handed alpha
Helix 20	AC2	B	182	186	Right-handed 310
Helix 21	AC3	B	201	210	Right-handed alpha
Helix 22	AC4	B	214	224	Right-handed alpha
Helix 23	AC5	C	13	28	Right-handed alpha
Helix 24	AC6	C	39	49	Right-handed alpha
Helix 25	AC7	C	60	70	Right-handed alpha
Helix 26	AC8	C	99	107	Right-handed alpha
Helix 27	AC9	C	118	131	Right-handed alpha
Helix 28	AD1	C	137	139	Right-handed 310
Helix 29	AD2	C	146	156	Right-handed alpha
Helix 30	AD3	C	166	172	Right-handed alpha
Helix 31	AD4	C	182	186	Right-handed 310
Helix 32	AD5	C	201	212	Right-handed alpha
Helix 33	AD6	C	214	224	Right-handed alpha
Helix 34	AD7	D	13	28	Right-handed alpha
Helix 35	AD8	D	39	49	Right-handed alpha
Helix 36	AD9	D	60	70	Right-handed alpha
Helix 37	AE1	D	99	106	Right-handed alpha
Helix 38	AE2	D	118	131	Right-handed alpha
Helix 39	AE3	D	133	138	Right-handed alpha
Helix 40	AE4	D	146	156	Right-handed alpha
Helix 41	AE5	D	166	172	Right-handed alpha
Helix 42	AE6	D	182	186	Right-handed 310
Helix 43	AE7	D	201	212	Right-handed alpha
Helix 44	AE8	D	214	224	Right-handed alpha
Helix 45	AE9	E	13	28	Right-handed alpha
Helix 46	AF1	E	39	49	Right-handed alpha
Helix 47	AF2	E	60	70	Right-handed alpha
Helix 48	AF3	E	99	106	Right-handed alpha
Helix 49	AF4	E	118	131	Right-handed alpha
Helix 50	AF5	E	146	156	Right-handed alpha
Helix 51	AF6	E	166	171	Right-handed alpha
Helix 52	AF7	E	182	186	Right-handed 310
Helix 53	AF8	E	201	212	Right-handed alpha
Helix 54	AF9	E	214	224	Right-handed alpha
Helix 55	AG1	F	13	28	Right-handed alpha
Helix 56	AG2	F	39	48	Right-handed alpha
Helix 57	AG3	F	60	70	Right-handed alpha
Helix 58	AG4	F	99	107	Right-handed alpha
Helix 59	AG5	F	118	131	Right-handed alpha
Helix 60	AG6	F	133	138	Right-handed alpha
Helix 61	AG7	F	146	156	Right-handed alpha
Helix 62	AG8	F	166	171	Right-handed alpha
Helix 63	AG9	F	182	186	Right-handed 310
Helix 64	AH1	F	201	210	Right-handed alpha
Helix 65	AH2	F	214	224	Right-handed alpha

There are 12 sheets in PDB entry 7TAV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	38	first strand
Strand 2	A	3	10	parallel
Strand 3	A	55	58	parallel
Strand 4	A	190	196	anti-parallel
Strand 5	A	73	81	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	144	first strand
Strand 2	A	110	113	parallel
Strand 3	A	161	165	parallel
Strand 4	A	84	89	anti-parallel
Strand 5	A	175	180	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	38	first strand
Strand 2	B	3	10	parallel
Strand 3	B	55	58	parallel
Strand 4	B	190	196	anti-parallel
Strand 5	B	73	81	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	144	first strand
Strand 2	B	110	113	parallel
Strand 3	B	161	165	parallel
Strand 4	B	84	89	anti-parallel
Strand 5	B	175	180	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	38	first strand
Strand 2	C	3	10	parallel
Strand 3	C	55	58	parallel
Strand 4	C	190	196	anti-parallel
Strand 5	C	73	81	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	144	first strand
Strand 2	C	110	113	parallel
Strand 3	C	161	165	parallel
Strand 4	C	84	89	anti-parallel
Strand 5	C	175	180	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	38	first strand
Strand 2	D	3	10	parallel
Strand 3	D	55	58	parallel
Strand 4	D	190	196	anti-parallel
Strand 5	D	73	81	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	144	first strand
Strand 2	D	110	113	parallel
Strand 3	D	161	165	parallel
Strand 4	D	84	89	anti-parallel
Strand 5	D	175	180	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	31	38	first strand
Strand 2	E	3	10	parallel
Strand 3	E	55	58	parallel
Strand 4	E	190	196	anti-parallel
Strand 5	E	73	81	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	144	first strand
Strand 2	E	110	113	parallel
Strand 3	E	161	165	parallel
Strand 4	E	84	89	anti-parallel
Strand 5	E	175	180	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	38	first strand
Strand 2	F	3	10	parallel
Strand 3	F	55	58	parallel
Strand 4	F	190	196	anti-parallel
Strand 5	F	73	81	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	141	144	first strand
Strand 2	F	110	113	parallel
Strand 3	F	161	165	parallel
Strand 4	F	84	89	anti-parallel
Strand 5	F	175	180	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TAV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TAV