Analysis of interatomic Contacts of Structural Units in PDB entry:
7TB0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TB0 entry

There are 4 chains in PDB entry 7TB0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	MET 420
B	MET 1	MET 420
C	MET 1	MET 420
D	MET 1	SER 49

There are 79 helices in PDB entry 7TB0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	32	Right-handed alpha
Helix 2	AA2	A	33	35	Right-handed 310
Helix 3	AA3	A	48	60	Right-handed alpha
Helix 4	AA4	A	87	92	Right-handed alpha
Helix 5	AA5	A	93	94	Right-handed 310
Helix 6	AA6	A	95	99	Right-handed 310
Helix 7	AA7	A	100	109	Right-handed alpha
Helix 8	AA8	A	126	136	Right-handed alpha
Helix 9	AA9	A	165	177	Right-handed alpha
Helix 10	AB1	A	191	204	Right-handed alpha
Helix 11	AB2	A	234	248	Right-handed alpha
Helix 12	AB3	A	258	261	Right-handed 310
Helix 13	AB4	A	262	272	Right-handed alpha
Helix 14	AB5	A	305	307	Right-handed 310
Helix 15	AB6	A	308	317	Right-handed alpha
Helix 16	AB7	A	334	341	Right-handed alpha
Helix 17	AB8	A	342	344	Right-handed 310
Helix 18	AB9	A	371	384	Right-handed alpha
Helix 19	AC1	A	393	398	Right-handed alpha
Helix 20	AC2	A	403	411	Right-handed alpha
Helix 21	AC3	B	21	32	Right-handed alpha
Helix 22	AC4	B	33	35	Right-handed 310
Helix 23	AC5	B	48	60	Right-handed alpha
Helix 24	AC6	B	87	92	Right-handed alpha
Helix 25	AC7	B	93	94	Right-handed 310
Helix 26	AC8	B	95	99	Right-handed 310
Helix 27	AC9	B	100	109	Right-handed alpha
Helix 28	AD1	B	126	136	Right-handed alpha
Helix 29	AD2	B	165	177	Right-handed alpha
Helix 30	AD3	B	191	204	Right-handed alpha
Helix 31	AD4	B	234	248	Right-handed alpha
Helix 32	AD5	B	258	261	Right-handed 310
Helix 33	AD6	B	262	272	Right-handed alpha
Helix 34	AD7	B	305	307	Right-handed 310
Helix 35	AD8	B	308	317	Right-handed alpha
Helix 36	AD9	B	334	341	Right-handed alpha
Helix 37	AE1	B	342	344	Right-handed 310
Helix 38	AE2	B	371	385	Right-handed alpha
Helix 39	AE3	B	393	398	Right-handed alpha
Helix 40	AE4	B	403	411	Right-handed alpha
Helix 41	AE5	C	21	32	Right-handed alpha
Helix 42	AE6	C	33	35	Right-handed 310
Helix 43	AE7	C	48	60	Right-handed alpha
Helix 44	AE8	C	87	92	Right-handed alpha
Helix 45	AE9	C	93	94	Right-handed 310
Helix 46	AF1	C	95	99	Right-handed 310
Helix 47	AF2	C	100	109	Right-handed alpha
Helix 48	AF3	C	126	136	Right-handed alpha
Helix 49	AF4	C	165	177	Right-handed alpha
Helix 50	AF5	C	191	204	Right-handed alpha
Helix 51	AF6	C	234	248	Right-handed alpha
Helix 52	AF7	C	258	261	Right-handed 310
Helix 53	AF8	C	262	272	Right-handed alpha
Helix 54	AF9	C	305	307	Right-handed 310
Helix 55	AG1	C	308	317	Right-handed alpha
Helix 56	AG2	C	334	341	Right-handed alpha
Helix 57	AG3	C	342	344	Right-handed 310
Helix 58	AG4	C	371	385	Right-handed alpha
Helix 59	AG5	C	393	398	Right-handed alpha
Helix 60	AG6	C	403	411	Right-handed alpha
Helix 61	AG7	D	21	32	Right-handed alpha
Helix 62	AG8	D	48	60	Right-handed alpha
Helix 63	AG9	D	87	92	Right-handed alpha
Helix 64	AH1	D	93	94	Right-handed 310
Helix 65	AH2	D	95	99	Right-handed 310
Helix 66	AH3	D	100	109	Right-handed alpha
Helix 67	AH4	D	126	136	Right-handed alpha
Helix 68	AH5	D	165	177	Right-handed alpha
Helix 69	AH6	D	191	204	Right-handed alpha
Helix 70	AH7	D	234	248	Right-handed alpha
Helix 71	AH8	D	258	261	Right-handed 310
Helix 72	AH9	D	262	272	Right-handed alpha
Helix 73	AI1	D	305	307	Right-handed 310
Helix 74	AI2	D	308	317	Right-handed alpha
Helix 75	AI3	D	334	341	Right-handed alpha
Helix 76	AI4	D	342	344	Right-handed 310
Helix 77	AI5	D	371	385	Right-handed alpha
Helix 78	AI6	D	393	398	Right-handed alpha
Helix 79	AI7	D	403	411	Right-handed alpha

There are 25 sheets in PDB entry 7TB0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	368	first strand
Strand 2	A	388	392	parallel
Strand 3	A	2	7	anti-parallel
Strand 4	A	414	419	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	16	first strand
Strand 2	A	251	255	parallel
Strand 3	A	282	286	anti-parallel
Strand 4	A	275	279	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	68	first strand
Strand 2	A	73	77	anti-parallel
Strand 3	A	40	43	anti-parallel
Strand 4	A	228	230	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	112	first strand
Strand 2	A	148	150	anti-parallel
Strand 3	A	139	141	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	160	first strand
Strand 2	A	182	186	parallel
Strand 3	A	215	219	anti-parallel
Strand 4	A	208	209	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	297	first strand
Strand 2	A	322	326	parallel
Strand 3	A	353	357	anti-parallel
Strand 4	A	346	350	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	368	first strand
Strand 2	B	388	392	parallel
Strand 3	B	2	7	anti-parallel
Strand 4	B	414	419	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	16	first strand
Strand 2	B	251	255	parallel
Strand 3	B	282	286	anti-parallel
Strand 4	B	275	279	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	68	first strand
Strand 2	B	73	77	anti-parallel
Strand 3	B	40	43	anti-parallel
Strand 4	B	228	230	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	112	first strand
Strand 2	B	148	150	anti-parallel
Strand 3	B	139	141	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	160	first strand
Strand 2	B	182	186	parallel
Strand 3	B	215	219	anti-parallel
Strand 4	B	208	209	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	296	297	first strand
Strand 2	B	322	326	parallel
Strand 3	B	353	357	anti-parallel
Strand 4	B	346	350	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	366	368	first strand
Strand 2	C	388	392	parallel
Strand 3	C	2	7	anti-parallel
Strand 4	C	414	419	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	16	first strand
Strand 2	C	251	255	parallel
Strand 3	C	282	286	anti-parallel
Strand 4	C	275	279	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	68	first strand
Strand 2	C	73	77	anti-parallel
Strand 3	C	40	43	anti-parallel
Strand 4	C	228	230	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	112	first strand
Strand 2	C	148	150	anti-parallel
Strand 3	C	139	141	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	160	first strand
Strand 2	C	182	186	parallel
Strand 3	C	215	219	anti-parallel
Strand 4	C	208	209	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	296	297	first strand
Strand 2	C	322	326	parallel
Strand 3	C	353	357	anti-parallel
Strand 4	C	346	350	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	366	368	first strand
Strand 2	D	388	392	parallel
Strand 3	D	2	7	anti-parallel
Strand 4	D	414	419	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	16	first strand
Strand 2	D	251	255	parallel
Strand 3	D	282	286	anti-parallel
Strand 4	D	275	279	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	224	225	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	68	first strand
Strand 2	D	73	77	anti-parallel
Strand 3	D	40	43	anti-parallel
Strand 4	D	228	230	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	112	first strand
Strand 2	D	148	150	anti-parallel
Strand 3	D	139	141	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	160	first strand
Strand 2	D	182	186	parallel
Strand 3	D	215	219	anti-parallel
Strand 4	D	208	209	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	296	297	first strand
Strand 2	D	322	326	parallel
Strand 3	D	353	357	anti-parallel
Strand 4	D	346	350	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TB0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TB0