Analysis of interatomic Contacts of Structural Units in PDB entry:
7TB6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TB6 entry

There is 1 chain in PDB entry 7TB6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8ASP 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7TB6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 27Right-handed alpha
Helix 2
AA2
A
31 40Right-handed alpha
Helix 3
AA3
A
42 58Right-handed alpha
Helix 4
AA4
A
80 83Right-handed 310
Helix 5
AA5
A
84 97Right-handed alpha
Helix 6
AA6
A
101 105Right-handed 310
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
A
203 206Right-handed 310
Helix 9
AA9
A
207 212Right-handed alpha
Helix 10
AB1
A
225 236Right-handed alpha
Helix 11
AB2
A
251 259Right-handed alpha
Helix 12
AB3
A
269 273Right-handed 310
Helix 13
AB4
A
279 291Right-handed alpha
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There are 3 sheets in PDB entry 7TB6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
69 72anti-parallel
Strand 3
A
61 64anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 186first strand
Strand 2
A
170 176anti-parallel
Strand 3
A
154 165anti-parallel
Strand 4
A
140 145anti-parallel
Strand 5
A
190 196anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 248first strand
Strand 2
A
213 220anti-parallel
Strand 3
A
275 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il