Analysis of interatomic Contacts of Structural Units in PDB entry:
7TBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TBN entry

There are 2 chains in PDB entry 7TBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 402ALA 774
B
 PHE 403ALA 774
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7TBN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
402 409Right-handed alpha
Helix 2
AA2
A
431 439Right-handed alpha
Helix 3
AA3
A
441 446Right-handed alpha
Helix 4
AA4
A
449 454Right-handed 310
Helix 5
AA5
A
459 472Right-handed alpha
Helix 6
AA6
A
521 565Right-handed alpha
Helix 7
AA7
A
567 597Right-handed alpha
Helix 8
AA8
A
598 608Right-handed alpha
Helix 9
AA9
A
621 630Right-handed alpha
Helix 10
AB1
A
631 641Right-handed alpha
Helix 11
AB2
A
654 662Right-handed alpha
Helix 12
AB3
A
664 674Right-handed alpha
Helix 13
AB4
A
687 695Right-handed alpha
Helix 14
AB5
A
697 707Right-handed alpha
Helix 15
AB6
A
720 729Right-handed alpha
Helix 16
AB7
A
730 740Right-handed alpha
Helix 17
AB8
A
753 761Right-handed alpha
Helix 18
AB9
A
763 773Right-handed alpha
Helix 19
AC1
B
404 409Right-handed alpha
Helix 20
AC2
B
431 439Right-handed alpha
Helix 21
AC3
B
441 446Right-handed alpha
Helix 22
AC4
B
449 454Right-handed 310
Helix 23
AC5
B
459 472Right-handed alpha
Helix 24
AC6
B
521 565Right-handed alpha
Helix 25
AC7
B
567 597Right-handed alpha
Helix 26
AC8
B
598 608Right-handed alpha
Helix 27
AC9
B
621 630Right-handed alpha
Helix 28
AD1
B
631 641Right-handed alpha
Helix 29
AD2
B
654 663Right-handed alpha
Helix 30
AD3
B
664 674Right-handed alpha
Helix 31
AD4
B
687 695Right-handed alpha
Helix 32
AD5
B
697 707Right-handed alpha
Helix 33
AD6
B
720 729Right-handed alpha
Helix 34
AD7
B
730 740Right-handed alpha
Helix 35
AD8
B
753 761Right-handed alpha
Helix 36
AD9
B
763 773Right-handed alpha
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There are 2 sheets in PDB entry 7TBN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 430first strand
Strand 2
A
415 418anti-parallel
Strand 3
A
506 515anti-parallel
Strand 4
A
489 500anti-parallel
Strand 5
A
476 483anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
427 430first strand
Strand 2
B
415 418anti-parallel
Strand 3
B
506 515anti-parallel
Strand 4
B
489 500anti-parallel
Strand 5
B
476 483anti-parallel
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