Analysis of interatomic Contacts of Structural Units in PDB entry:
7TBQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TBQ entry

There are 4 chains in PDB entry 7TBQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 400ALA 774
B
 GLY 400ALA 774
C
 GLY 400ALA 774
D
 GLY 400LYS 564
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 7TBQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
401 409Right-handed alpha
Helix 2
AA2
A
431 439Right-handed alpha
Helix 3
AA3
A
441 446Right-handed alpha
Helix 4
AA4
A
449 454Right-handed 310
Helix 5
AA5
A
459 472Right-handed alpha
Helix 6
AA6
A
522 565Right-handed alpha
Helix 7
AA7
A
567 597Right-handed alpha
Helix 8
AA8
A
598 608Right-handed alpha
Helix 9
AA9
A
621 630Right-handed alpha
Helix 10
AB1
A
631 641Right-handed alpha
Helix 11
AB2
A
654 663Right-handed alpha
Helix 12
AB3
A
664 673Right-handed alpha
Helix 13
AB4
A
687 696Right-handed alpha
Helix 14
AB5
A
697 706Right-handed alpha
Helix 15
AB6
A
720 728Right-handed alpha
Helix 16
AB7
A
730 740Right-handed alpha
Helix 17
AB8
A
755 760Right-handed alpha
Helix 18
AB9
A
767 772Right-handed alpha
Helix 19
AC1
B
402 409Right-handed alpha
Helix 20
AC2
B
431 439Right-handed alpha
Helix 21
AC3
B
441 445Right-handed 310
Helix 22
AC4
B
449 454Right-handed 310
Helix 23
AC5
B
459 472Right-handed alpha
Helix 24
AC6
B
521 564Right-handed alpha
Helix 25
AC7
B
569 597Right-handed alpha
Helix 26
AC8
B
598 609Right-handed alpha
Helix 27
AC9
B
621 630Right-handed alpha
Helix 28
AD1
B
631 641Right-handed alpha
Helix 29
AD2
B
654 662Right-handed alpha
Helix 30
AD3
B
664 674Right-handed alpha
Helix 31
AD4
B
687 695Right-handed alpha
Helix 32
AD5
B
697 707Right-handed alpha
Helix 33
AD6
B
720 729Right-handed alpha
Helix 34
AD7
B
730 740Right-handed alpha
Helix 35
AD8
B
753 761Right-handed alpha
Helix 36
AD9
B
763 773Right-handed alpha
Helix 37
AE1
C
401 409Right-handed alpha
Helix 38
AE2
C
431 439Right-handed alpha
Helix 39
AE3
C
441 445Right-handed 310
Helix 40
AE4
C
449 454Right-handed 310
Helix 41
AE5
C
459 472Right-handed alpha
Helix 42
AE6
C
521 564Right-handed alpha
Helix 43
AE7
C
567 597Right-handed alpha
Helix 44
AE8
C
598 608Right-handed alpha
Helix 45
AE9
C
621 630Right-handed alpha
Helix 46
AF1
C
631 641Right-handed alpha
Helix 47
AF2
C
654 663Right-handed alpha
Helix 48
AF3
C
664 673Right-handed alpha
Helix 49
AF4
C
687 696Right-handed alpha
Helix 50
AF5
C
697 706Right-handed alpha
Helix 51
AF6
C
720 728Right-handed alpha
Helix 52
AF7
C
730 740Right-handed alpha
Helix 53
AF8
C
755 760Right-handed alpha
Helix 54
AF9
C
763 769Right-handed alpha
Helix 55
AG1
D
401 409Right-handed alpha
Helix 56
AG2
D
431 439Right-handed alpha
Helix 57
AG3
D
441 445Right-handed 310
Helix 58
AG4
D
449 454Right-handed 310
Helix 59
AG5
D
459 472Right-handed alpha
Helix 60
AG6
D
521 564Right-handed alpha
Helix 61
AG7
D
567 597Right-handed alpha
Helix 62
AG8
D
598 609Right-handed alpha
Helix 63
AG9
D
621 630Right-handed alpha
Helix 64
AH1
D
631 641Right-handed alpha
Helix 65
AH2
D
654 662Right-handed alpha
Helix 66
AH3
D
664 674Right-handed alpha
Helix 67
AH4
D
687 695Right-handed alpha
Helix 68
AH5
D
697 707Right-handed alpha
Helix 69
AH6
D
720 729Right-handed alpha
Helix 70
AH7
D
730 740Right-handed alpha
Helix 71
AH8
D
753 761Right-handed alpha
Helix 72
AH9
D
763 773Right-handed alpha
Helix 73
AI1
E
431 439Right-handed alpha
Helix 74
AI2
E
441 446Right-handed alpha
Helix 75
AI3
E
449 454Right-handed 310
Helix 76
AI4
E
459 473Right-handed alpha
Helix 77
AI5
E
522 565Right-handed alpha
Helix 78
AI6
E
569 596Right-handed alpha
Helix 79
AI7
E
598 609Right-handed alpha
Helix 80
AI8
E
621 630Right-handed alpha
Helix 81
AI9
E
631 642Right-handed alpha
Helix 82
AJ1
E
654 663Right-handed alpha
Helix 83
AJ2
E
664 673Right-handed alpha
Helix 84
AJ3
E
687 695Right-handed alpha
Helix 85
AJ4
E
697 705Right-handed alpha
Helix 86
AJ5
E
706 708Right-handed 310
Helix 87
AJ6
E
720 728Right-handed alpha
Helix 88
AJ7
E
730 741Right-handed alpha
Helix 89
AJ8
E
754 759Right-handed alpha
Helix 90
AJ9
E
763 772Right-handed alpha
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There are 6 sheets in PDB entry 7TBQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 430first strand
Strand 2
A
415 418anti-parallel
Strand 3
A
506 516anti-parallel
Strand 4
A
489 500anti-parallel
Strand 5
A
476 483anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
427 430first strand
Strand 2
B
415 418anti-parallel
Strand 3
B
506 516anti-parallel
Strand 4
B
489 500anti-parallel
Strand 5
B
476 483anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
427 430first strand
Strand 2
C
415 418anti-parallel
Strand 3
C
506 516anti-parallel
Strand 4
C
489 500anti-parallel
Strand 5
C
476 483anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
427 430first strand
Strand 2
D
415 418anti-parallel
Strand 3
D
506 516anti-parallel
Strand 4
D
489 500anti-parallel
Strand 5
D
476 483anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
427 430first strand
Strand 2
E
415 418anti-parallel
Strand 3
E
506 512anti-parallel
Strand 4
E
498 500anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
476 483first strand
Strand 2
E
489 496anti-parallel
Strand 3
E
515 516anti-parallel
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