Analysis of interatomic Contacts of Structural Units in PDB entry:
7TBV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TBV entry

There are 2 chains in PDB entry 7TBV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 856	GLU 1551
B	SER 857	ASP 1467

There are133 helices in PDB entry 7TBV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	870	883	Right-handed alpha
Helix 2	AA2	A	889	898	Right-handed alpha
Helix 3	AA3	A	900	909	Right-handed alpha
Helix 4	AA4	A	909	928	Right-handed alpha
Helix 5	AA5	A	937	942	Right-handed 310
Helix 6	AA6	A	943	956	Right-handed alpha
Helix 7	AA7	A	985	1001	Right-handed alpha
Helix 8	AA8	A	1013	1032	Right-handed alpha
Helix 9	AA9	A	1053	1059	Right-handed 310
Helix 10	AB1	A	1060	1065	Right-handed alpha
Helix 11	AB2	A	1076	1078	Right-handed 310
Helix 12	AB3	A	1082	1095	Right-handed alpha
Helix 13	AB4	A	1107	1111	Right-handed 310
Helix 14	AB5	A	1118	1132	Right-handed alpha
Helix 15	AB6	A	1144	1155	Right-handed alpha
Helix 16	AB7	A	1175	1188	Right-handed alpha
Helix 17	AB8	A	1202	1215	Right-handed alpha
Helix 18	AB9	A	1226	1228	Right-handed 310
Helix 19	AC1	A	1229	1236	Right-handed alpha
Helix 20	AC2	A	1256	1266	Right-handed alpha
Helix 21	AC3	A	1285	1298	Right-handed alpha
Helix 22	AC4	A	1310	1318	Right-handed alpha
Helix 23	AC5	A	1335	1341	Right-handed 310
Helix 24	AC6	A	1345	1352	Right-handed alpha
Helix 25	AC7	A	1369	1381	Right-handed alpha
Helix 26	AC8	A	1399	1410	Right-handed alpha
Helix 27	AC9	A	1421	1431	Right-handed alpha
Helix 28	AD1	A	1433	1436	Right-handed 310
Helix 29	AD2	A	1443	1449	Right-handed alpha
Helix 30	AD3	A	1467	1480	Right-handed alpha
Helix 31	AD4	A	1502	1511	Right-handed alpha
Helix 32	AD5	A	1518	1536	Right-handed alpha
Helix 33	AD6	A	1540	1550	Right-handed alpha
Helix 34	AD7	B	868	883	Right-handed alpha
Helix 35	AD8	B	889	898	Right-handed alpha
Helix 36	AD9	B	900	909	Right-handed alpha
Helix 37	AE1	B	909	928	Right-handed alpha
Helix 38	AE2	B	937	942	Right-handed 310
Helix 39	AE3	B	943	956	Right-handed alpha
Helix 40	AE4	B	985	1002	Right-handed alpha
Helix 41	AE5	B	1013	1032	Right-handed alpha
Helix 42	AE6	B	1053	1059	Right-handed 310
Helix 43	AE7	B	1060	1065	Right-handed alpha
Helix 44	AE8	B	1076	1078	Right-handed 310
Helix 45	AE9	B	1082	1095	Right-handed alpha
Helix 46	AF1	B	1107	1111	Right-handed 310
Helix 47	AF2	B	1118	1132	Right-handed alpha
Helix 48	AF3	B	1144	1155	Right-handed alpha
Helix 49	AF4	B	1175	1188	Right-handed alpha
Helix 50	AF5	B	1202	1215	Right-handed alpha
Helix 51	AF6	B	1226	1228	Right-handed 310
Helix 52	AF7	B	1229	1236	Right-handed alpha
Helix 53	AF8	B	1255	1266	Right-handed alpha
Helix 54	AF9	B	1285	1298	Right-handed alpha
Helix 55	AG1	B	1310	1318	Right-handed alpha
Helix 56	AG2	B	1335	1341	Right-handed 310
Helix 57	AG3	B	1345	1352	Right-handed alpha
Helix 58	AG4	B	1369	1381	Right-handed alpha
Helix 59	AG5	B	1399	1410	Right-handed alpha
Helix 60	AG6	B	1422	1431	Right-handed alpha
Helix 61	AG7	B	1433	1436	Right-handed 310
Helix 62	AG8	B	1443	1449	Right-handed alpha
Helix 63	AG9	B	1468	1480	Right-handed alpha
Helix 64	AH1	B	1481	1483	Right-handed 310
Helix 65	AH2	B	1502	1511	Right-handed alpha
Helix 66	AH3	B	1518	1536	Right-handed alpha
Helix 67	AH4	B	1540	1550	Right-handed alpha
Helix 68	AH5	C	870	883	Right-handed alpha
Helix 69	AH6	C	889	898	Right-handed alpha
Helix 70	AH7	C	900	909	Right-handed alpha
Helix 71	AH8	C	909	928	Right-handed alpha
Helix 72	AH9	C	937	942	Right-handed 310
Helix 73	AI1	C	943	956	Right-handed alpha
Helix 74	AI2	C	985	1002	Right-handed alpha
Helix 75	AI3	C	1013	1032	Right-handed alpha
Helix 76	AI4	C	1053	1059	Right-handed 310
Helix 77	AI5	C	1060	1065	Right-handed alpha
Helix 78	AI6	C	1076	1078	Right-handed 310
Helix 79	AI7	C	1082	1095	Right-handed alpha
Helix 80	AI8	C	1107	1111	Right-handed 310
Helix 81	AI9	C	1118	1132	Right-handed alpha
Helix 82	AJ1	C	1144	1155	Right-handed alpha
Helix 83	AJ2	C	1175	1188	Right-handed alpha
Helix 84	AJ3	C	1201	1215	Right-handed alpha
Helix 85	AJ4	C	1226	1228	Right-handed 310
Helix 86	AJ5	C	1229	1236	Right-handed alpha
Helix 87	AJ6	C	1256	1266	Right-handed alpha
Helix 88	AJ7	C	1285	1298	Right-handed alpha
Helix 89	AJ8	C	1310	1316	Right-handed alpha
Helix 90	AJ9	C	1335	1341	Right-handed 310
Helix 91	AK1	C	1345	1352	Right-handed alpha
Helix 92	AK2	C	1369	1381	Right-handed alpha
Helix 93	AK3	C	1399	1410	Right-handed alpha
Helix 94	AK4	C	1421	1431	Right-handed alpha
Helix 95	AK5	C	1433	1436	Right-handed 310
Helix 96	AK6	C	1443	1449	Right-handed alpha
Helix 97	AK7	C	1468	1481	Right-handed alpha
Helix 98	AK8	C	1502	1513	Right-handed alpha
Helix 99	AK9	C	1518	1536	Right-handed alpha
Helix 100	AL1	C	1540	1549	Right-handed alpha
Helix 101	AL2	D	870	883	Right-handed alpha
Helix 102	AL3	D	889	898	Right-handed alpha
Helix 103	AL4	D	900	909	Right-handed alpha
Helix 104	AL5	D	909	928	Right-handed alpha
Helix 105	AL6	D	937	942	Right-handed 310
Helix 106	AL7	D	943	956	Right-handed alpha
Helix 107	AL8	D	985	1002	Right-handed alpha
Helix 108	AL9	D	1013	1032	Right-handed alpha
Helix 109	AM1	D	1053	1059	Right-handed 310
Helix 110	AM2	D	1060	1065	Right-handed alpha
Helix 111	AM3	D	1076	1078	Right-handed 310
Helix 112	AM4	D	1082	1095	Right-handed alpha
Helix 113	AM5	D	1107	1111	Right-handed 310
Helix 114	AM6	D	1118	1132	Right-handed alpha
Helix 115	AM7	D	1144	1155	Right-handed alpha
Helix 116	AM8	D	1175	1188	Right-handed alpha
Helix 117	AM9	D	1202	1214	Right-handed alpha
Helix 118	AN1	D	1226	1228	Right-handed 310
Helix 119	AN2	D	1229	1236	Right-handed alpha
Helix 120	AN3	D	1256	1266	Right-handed alpha
Helix 121	AN4	D	1285	1298	Right-handed alpha
Helix 122	AN5	D	1310	1318	Right-handed alpha
Helix 123	AN6	D	1335	1341	Right-handed 310
Helix 124	AN7	D	1345	1352	Right-handed alpha
Helix 125	AN8	D	1369	1381	Right-handed alpha
Helix 126	AN9	D	1399	1410	Right-handed alpha
Helix 127	AO1	D	1421	1431	Right-handed alpha
Helix 128	AO2	D	1433	1436	Right-handed 310
Helix 129	AO3	D	1443	1450	Right-handed alpha
Helix 130	AO4	D	1467	1480	Right-handed alpha
Helix 131	AO5	D	1502	1513	Right-handed alpha
Helix 132	AO6	D	1518	1536	Right-handed alpha
Helix 133	AO7	D	1540	1550	Right-handed alpha

There are 16 sheets in PDB entry 7TBV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	885	888	first strand
Strand 2	A	932	935	parallel
Strand 3	A	861	864	parallel
Strand 4	A	959	965	parallel
Strand 5	A	1004	1008	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1220	1225	first strand
Strand 2	A	1192	1198	parallel
Strand 3	A	1159	1165	parallel
Strand 4	A	1136	1140	parallel
Strand 5	A	1101	1104	parallel
Strand 6	A	1070	1074	parallel
Strand 7	A	1045	1049	parallel
Strand 8	A	1240	1243	parallel
Strand 9	A	1254	1255	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1302	1307	first strand
Strand 2	A	1273	1278	parallel
Strand 3	A	1324	1329	parallel
Strand 4	A	1356	1360	anti-parallel
Strand 5	A	1363	1367	anti-parallel
Strand 6	A	1343	1344	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1438	1440	first strand
Strand 2	A	1415	1418	parallel
Strand 3	A	1390	1394	parallel
Strand 4	A	1453	1458	parallel
Strand 5	A	1491	1494	parallel
Strand 6	A	1515	1517	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	885	888	first strand
Strand 2	B	932	935	parallel
Strand 3	B	861	864	parallel
Strand 4	B	959	965	parallel
Strand 5	B	1004	1008	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1220	1225	first strand
Strand 2	B	1192	1198	parallel
Strand 3	B	1159	1165	parallel
Strand 4	B	1136	1140	parallel
Strand 5	B	1101	1104	parallel
Strand 6	B	1070	1074	parallel
Strand 7	B	1045	1049	parallel
Strand 8	B	1240	1242	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1302	1307	first strand
Strand 2	B	1273	1278	parallel
Strand 3	B	1324	1329	parallel
Strand 4	B	1356	1360	anti-parallel
Strand 5	B	1363	1367	anti-parallel
Strand 6	B	1343	1344	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1438	1440	first strand
Strand 2	B	1415	1418	parallel
Strand 3	B	1390	1394	parallel
Strand 4	B	1453	1458	parallel
Strand 5	B	1491	1494	parallel
Strand 6	B	1515	1517	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	885	888	first strand
Strand 2	C	932	935	parallel
Strand 3	C	861	864	parallel
Strand 4	C	959	964	parallel
Strand 5	C	1004	1007	parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1220	1225	first strand
Strand 2	C	1192	1198	parallel
Strand 3	C	1159	1165	parallel
Strand 4	C	1136	1140	parallel
Strand 5	C	1101	1104	parallel
Strand 6	C	1070	1074	parallel
Strand 7	C	1045	1049	parallel
Strand 8	C	1240	1243	parallel
Strand 9	C	1254	1255	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1302	1306	first strand
Strand 2	C	1273	1277	parallel
Strand 3	C	1324	1329	parallel
Strand 4	C	1356	1360	anti-parallel
Strand 5	C	1363	1367	anti-parallel
Strand 6	C	1343	1344	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1438	1440	first strand
Strand 2	C	1415	1418	parallel
Strand 3	C	1390	1394	parallel
Strand 4	C	1453	1458	parallel
Strand 5	C	1491	1494	parallel
Strand 6	C	1515	1517	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	885	888	first strand
Strand 2	D	932	935	parallel
Strand 3	D	861	864	parallel
Strand 4	D	959	964	parallel
Strand 5	D	1004	1007	parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1220	1225	first strand
Strand 2	D	1192	1198	parallel
Strand 3	D	1159	1165	parallel
Strand 4	D	1136	1140	parallel
Strand 5	D	1101	1104	parallel
Strand 6	D	1070	1074	parallel
Strand 7	D	1045	1049	parallel
Strand 8	D	1240	1243	parallel
Strand 9	D	1254	1255	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1302	1307	first strand
Strand 2	D	1273	1278	parallel
Strand 3	D	1324	1329	parallel
Strand 4	D	1356	1360	anti-parallel
Strand 5	D	1363	1367	anti-parallel
Strand 6	D	1343	1344	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1438	1440	first strand
Strand 2	D	1415	1418	parallel
Strand 3	D	1390	1394	parallel
Strand 4	D	1453	1458	parallel
Strand 5	D	1491	1494	parallel
Strand 6	D	1515	1517	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TBV

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TBV