Analysis of interatomic Contacts of Structural Units in PDB entry:
7TBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TBW entry

There is 1 chain in PDB entry 7TBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 3GLN 2224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 7TBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 21Right-handed alpha
Helix 2
AA2
A
21 45Right-handed alpha
Helix 3
AA3
A
62 64Right-handed 310
Helix 4
AA4
A
65 76Right-handed alpha
Helix 5
AA5
A
86 90Right-handed 310
Helix 6
AA6
A
100 118Right-handed alpha
Helix 7
AA7
A
120 136Right-handed alpha
Helix 8
AA8
A
200 210Right-handed alpha
Helix 9
AA9
A
215 227Right-handed alpha
Helix 10
AB1
A
229 234Right-handed alpha
Helix 11
AB2
A
235 240Right-handed alpha
Helix 12
AB3
A
252 275Right-handed alpha
Helix 13
AB4
A
277 289Right-handed alpha
Helix 14
AB5
A
298 309Right-handed alpha
Helix 15
AB6
A
353 364Right-handed alpha
Helix 16
AB7
A
368 380Right-handed alpha
Helix 17
AB8
A
389 405Right-handed alpha
Helix 18
AB9
A
406 410Right-handed 310
Helix 19
AC1
A
411 417Right-handed alpha
Helix 20
AC2
A
418 427Right-handed alpha
Helix 21
AC3
A
430 441Right-handed alpha
Helix 22
AC4
A
444 454Right-handed alpha
Helix 23
AC5
A
459 468Right-handed alpha
Helix 24
AC6
A
483 502Right-handed alpha
Helix 25
AC7
A
515 529Right-handed alpha
Helix 26
AC8
A
586 591Right-handed alpha
Helix 27
AC9
A
592 609Right-handed alpha
Helix 28
AD1
A
630 644Right-handed alpha
Helix 29
AD2
A
645 665Right-handed alpha
Helix 30
AD3
A
666 675Right-handed alpha
Helix 31
AD4
A
677 707Right-handed alpha
Helix 32
AD5
A
714 738Right-handed alpha
Helix 33
AD6
A
742 757Right-handed alpha
Helix 34
AD7
A
758 768Right-handed alpha
Helix 35
AD8
A
772 780Right-handed alpha
Helix 36
AD9
A
784 800Right-handed alpha
Helix 37
AE1
A
820 846Right-handed alpha
Helix 38
AE2
A
939 947Right-handed alpha
Helix 39
AE3
A
967 973Right-handed alpha
Helix 40
AE4
A
989 1000Right-handed alpha
Helix 41
AE5
A
1004 1020Right-handed alpha
Helix 42
AE6
A
1029 1033Right-handed 310
Helix 43
AE7
A
1034 1046Right-handed alpha
Helix 44
AE8
A
1064 1078Right-handed alpha
Helix 45
AE9
A
1090 1097Right-handed alpha
Helix 46
AF1
A
1114 1122Right-handed alpha
Helix 47
AF2
A
1182 1191Right-handed alpha
Helix 48
AF3
A
1218 1228Right-handed alpha
Helix 49
AF4
A
1243 1254Right-handed alpha
Helix 50
AF5
A
1321 1342Right-handed alpha
Helix 51
AF6
A
1343 1351Right-handed alpha
Helix 52
AF7
A
1351 1365Right-handed alpha
Helix 53
AF8
A
1400 1409Right-handed alpha
Helix 54
AF9
A
1445 1450Right-handed alpha
Helix 55
AG1
A
1504 1523Right-handed alpha
Helix 56
AG2
A
1548 1561Right-handed alpha
Helix 57
AG3
A
1570 1583Right-handed alpha
Helix 58
AG4
A
1600 1618Right-handed alpha
Helix 59
AG5
A
1643 1668Right-handed alpha
Helix 60
AG6
A
1671 1681Right-handed alpha
Helix 61
AG7
A
1683 1691Right-handed alpha
Helix 62
AG8
A
1694 1724Right-handed alpha
Helix 63
AG9
A
1734 1754Right-handed alpha
Helix 64
AH1
A
1762 1790Right-handed alpha
Helix 65
AH2
A
1795 1808Right-handed alpha
Helix 66
AH3
A
1810 1834Right-handed alpha
Helix 67
AH4
A
1848 1872Right-handed alpha
Helix 68
AH5
A
1892 1905Right-handed alpha
Helix 69
AH6
A
1951 1961Right-handed alpha
Helix 70
AH7
A
1980 1986Right-handed alpha
Helix 71
AH8
A
2002 2015Right-handed alpha
Helix 72
AH9
A
2017 2019Right-handed 310
Helix 73
AI1
A
2020 2031Right-handed alpha
Helix 74
AI2
A
2041 2045Right-handed 310
Helix 75
AI3
A
2046 2059Right-handed alpha
Helix 76
AI4
A
2076 2093Right-handed alpha
Helix 77
AI5
A
2103 2110Right-handed alpha
Helix 78
AI6
A
2128 2135Right-handed alpha
Helix 79
AI7
A
2152 2163Right-handed alpha
Helix 80
AI8
A
2186 2197Right-handed alpha
Helix 81
AI9
A
2212 2224Right-handed alpha
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There are 10 sheets in PDB entry 7TBW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
628 629anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
616 621anti-parallel
Strand 3
A
1588 1594parallel
Strand 4
A
1533 1539anti-parallel
Strand 5
A
1388 1393parallel
Strand 6
A
1496 1499parallel
Strand 7
A
1487 1490anti-parallel
Strand 8
A
1437 1438anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 537first strand
Strand 2
A
551 557anti-parallel
Strand 3
A
1628 1633parallel
Strand 4
A
1377 1378anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
922 923first strand
Strand 2
A
899 905anti-parallel
Strand 3
A
954 959anti-parallel
Strand 4
A
962 963anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
975 978first strand
Strand 2
A
1053 1057parallel
Strand 3
A
1084 1087parallel
Strand 4
A
929 933parallel
Strand 5
A
1101 1105parallel
Strand 6
A
1108 1113anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1195 1198first strand
Strand 2
A
1205 1208anti-parallel
Strand 3
A
1126 1129anti-parallel
Strand 4
A
1239 1241anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1934 1936first strand
Strand 2
A
1912 1918anti-parallel
Strand 3
A
1967 1972anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1989 1991first strand
Strand 2
A
2065 2069parallel
Strand 3
A
2096 2100parallel
Strand 4
A
1941 1946parallel
Strand 5
A
2113 2118parallel
Strand 6
A
2121 2122anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1989 1991first strand
Strand 2
A
2065 2069parallel
Strand 3
A
2096 2100parallel
Strand 4
A
1941 1946parallel
Strand 5
A
2113 2118parallel
Strand 6
A
2126 2127anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2168 2169first strand
Strand 2
A
2175 2179anti-parallel
Strand 3
A
2140 2144anti-parallel
Strand 4
A
2205 2209anti-parallel
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