Analysis of interatomic Contacts of Structural Units in PDB entry:
7TBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TBX entry

There are 2 chains in PDB entry 7TBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24GLY 291
B
 THR 23GLY 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7TBX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 38Right-handed alpha
Helix 2
AA2
A
71 84Right-handed alpha
Helix 3
AA3
A
109 113Right-handed 310
Helix 4
AA4
A
119 129Right-handed alpha
Helix 5
AA5
A
131 141Right-handed alpha
Helix 6
AA6
A
144 156Right-handed alpha
Helix 7
AA7
A
182 195Right-handed alpha
Helix 8
AA8
A
200 213Right-handed alpha
Helix 9
AA9
A
276 290Right-handed alpha
Helix 10
AB1
B
25 38Right-handed alpha
Helix 11
AB2
B
71 84Right-handed alpha
Helix 12
AB3
B
118 129Right-handed alpha
Helix 13
AB4
B
131 141Right-handed alpha
Helix 14
AB5
B
144 156Right-handed alpha
Helix 15
AB6
B
182 195Right-handed alpha
Helix 16
AB7
B
200 213Right-handed alpha
Helix 17
AB8
B
276 290Right-handed alpha
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There are 5 sheets in PDB entry 7TBX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
43 50anti-parallel
Strand 3
A
259 266anti-parallel
Strand 4
A
244 251anti-parallel
Strand 5
A
230 237anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
180 181anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
117 118anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 60first strand
Strand 2
B
43 50anti-parallel
Strand 3
B
259 266anti-parallel
Strand 4
B
245 251anti-parallel
Strand 5
B
230 236anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
180 181anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il