Analysis of interatomic Contacts of Structural Units in PDB entry:
7TC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TC8 entry

There are 6 chains in PDB entry 7TC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ASN 17PHE 526
E
 ALA 16PHE 526
B
 GLU 6LYS 389
C
 GLU 6LYS 389
G
 LEU 4HIS 165
H
 LEU 4HIS 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 7TC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
24 30Right-handed alpha
Helix 2
AA2
D
31 36Right-handed 310
Helix 3
AA3
D
63 84Right-handed alpha
Helix 4
AA4
D
84 89Right-handed alpha
Helix 5
AA5
D
96 128Right-handed alpha
Helix 6
AA6
D
130 162Right-handed alpha
Helix 7
AA7
D
170 175Right-handed alpha
Helix 8
AA8
D
176 178Right-handed 310
Helix 9
AA9
D
179 189Right-handed alpha
Helix 10
AB1
D
189 194Right-handed alpha
Helix 11
AB2
D
196 205Right-handed alpha
Helix 12
AB3
D
207 212Right-handed alpha
Helix 13
AB4
D
212 227Right-handed alpha
Helix 14
AB5
D
230 241Right-handed alpha
Helix 15
AB6
D
242 258Right-handed alpha
Helix 16
AB7
D
260 292Right-handed alpha
Helix 17
AB8
D
300 310Right-handed alpha
Helix 18
AB9
D
318 325Right-handed 310
Helix 19
AC1
D
331 353Right-handed alpha
Helix 20
AC2
D
354 357Right-handed 310
Helix 21
AC3
D
365 376Right-handed alpha
Helix 22
AC4
D
378 393Right-handed alpha
Helix 23
AC5
D
397 401Right-handed 310
Helix 24
AC6
D
403 411Right-handed alpha
Helix 25
AC7
D
450 460Right-handed alpha
Helix 26
AC8
D
461 464Right-handed 310
Helix 27
AC9
D
468 473Right-handed alpha
Helix 28
AD1
D
477 485Right-handed alpha
Helix 29
AD2
D
508 516Right-handed alpha
Helix 30
AD3
D
521 526Right-handed 310
Helix 31
AD4
E
24 30Right-handed alpha
Helix 32
AD5
E
31 36Right-handed 310
Helix 33
AD6
E
63 84Right-handed alpha
Helix 34
AD7
E
84 89Right-handed alpha
Helix 35
AD8
E
96 128Right-handed alpha
Helix 36
AD9
E
130 162Right-handed alpha
Helix 37
AE1
E
170 175Right-handed alpha
Helix 38
AE2
E
176 178Right-handed 310
Helix 39
AE3
E
179 189Right-handed alpha
Helix 40
AE4
E
189 194Right-handed alpha
Helix 41
AE5
E
196 205Right-handed alpha
Helix 42
AE6
E
207 212Right-handed alpha
Helix 43
AE7
E
212 227Right-handed alpha
Helix 44
AE8
E
230 241Right-handed alpha
Helix 45
AE9
E
242 257Right-handed alpha
Helix 46
AF1
E
260 293Right-handed alpha
Helix 47
AF2
E
300 309Right-handed alpha
Helix 48
AF3
E
315 322Right-handed alpha
Helix 49
AF4
E
323 325Right-handed 310
Helix 50
AF5
E
331 353Right-handed alpha
Helix 51
AF6
E
354 357Right-handed 310
Helix 52
AF7
E
365 376Right-handed alpha
Helix 53
AF8
E
378 393Right-handed alpha
Helix 54
AF9
E
397 401Right-handed 310
Helix 55
AG1
E
403 411Right-handed alpha
Helix 56
AG2
E
450 460Right-handed alpha
Helix 57
AG3
E
461 464Right-handed 310
Helix 58
AG4
E
468 473Right-handed alpha
Helix 59
AG5
E
477 485Right-handed alpha
Helix 60
AG6
E
508 516Right-handed alpha
Helix 61
AG7
E
521 526Right-handed 310
Helix 62
AG8
B
13 24Right-handed alpha
Helix 63
AG9
B
47 54Right-handed alpha
Helix 64
AH1
B
84 88Right-handed 310
Helix 65
AH2
B
94 98Right-handed 310
Helix 66
AH3
B
105 130Right-handed alpha
Helix 67
AH4
B
131 136Right-handed 310
Helix 68
AH5
B
137 144Right-handed alpha
Helix 69
AH6
B
147 162Right-handed alpha
Helix 70
AH7
B
163 170Right-handed alpha
Helix 71
AH8
B
172 204Right-handed alpha
Helix 72
AH9
B
211 221Right-handed alpha
Helix 73
AI1
B
224 237Right-handed alpha
Helix 74
AI2
B
240 251Right-handed alpha
Helix 75
AI3
B
251 262Right-handed alpha
Helix 76
AI4
B
264 269Right-handed alpha
Helix 77
AI5
B
270 273Right-handed 310
Helix 78
AI6
B
275 300Right-handed alpha
Helix 79
AI7
B
309 336Right-handed alpha
Helix 80
AI8
B
337 342Right-handed 310
Helix 81
AI9
B
348 367Right-handed alpha
Helix 82
AJ1
B
368 372Right-handed 310
Helix 83
AJ2
B
376 386Right-handed alpha
Helix 84
AJ3
C
13 24Right-handed alpha
Helix 85
AJ4
C
47 54Right-handed alpha
Helix 86
AJ5
C
84 88Right-handed 310
Helix 87
AJ6
C
105 131Right-handed alpha
Helix 88
AJ7
C
132 136Right-handed 310
Helix 89
AJ8
C
137 144Right-handed alpha
Helix 90
AJ9
C
147 162Right-handed alpha
Helix 91
AK1
C
163 170Right-handed alpha
Helix 92
AK2
C
172 204Right-handed alpha
Helix 93
AK3
C
211 221Right-handed alpha
Helix 94
AK4
C
224 237Right-handed alpha
Helix 95
AK5
C
240 251Right-handed alpha
Helix 96
AK6
C
251 263Right-handed alpha
Helix 97
AK7
C
264 269Right-handed alpha
Helix 98
AK8
C
270 273Right-handed 310
Helix 99
AK9
C
275 300Right-handed alpha
Helix 100
AL1
C
309 336Right-handed alpha
Helix 101
AL2
C
337 342Right-handed 310
Helix 102
AL3
C
348 367Right-handed alpha
Helix 103
AL4
C
368 372Right-handed 310
Helix 104
AL5
C
376 386Right-handed alpha
Helix 105
AL6
G
9 21Right-handed alpha
Helix 106
AL7
G
24 40Right-handed alpha
Helix 107
AL8
G
52 72Right-handed alpha
Helix 108
AL9
G
73 80Right-handed alpha
Helix 109
AM1
G
86 100Right-handed alpha
Helix 110
AM2
G
103 119Right-handed alpha
Helix 111
AM3
G
124 145Right-handed alpha
Helix 112
AM4
G
151 160Right-handed alpha
Helix 113
AM5
H
9 20Right-handed alpha
Helix 114
AM6
H
24 40Right-handed alpha
Helix 115
AM7
H
52 72Right-handed alpha
Helix 116
AM8
H
73 80Right-handed alpha
Helix 117
AM9
H
86 101Right-handed alpha
Helix 118
AN1
H
103 119Right-handed alpha
Helix 119
AN2
H
124 144Right-handed alpha
Helix 120
AN3
H
151 160Right-handed alpha
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There are 4 sheets in PDB entry 7TC8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
416 417first strand
Strand 2
D
424 425anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
445 448first strand
Strand 2
D
437 440anti-parallel
Strand 3
G
162 163anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
416 417first strand
Strand 2
E
424 425anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
444 448first strand
Strand 2
E
437 441anti-parallel
Strand 3
H
162 163anti-parallel
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