Analysis of interatomic Contacts of Structural Units in PDB entry:
7TCX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TCX entry

There are 4 chains in PDB entry 7TCX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 263
B
 MET 1VAL 263
C
 MET 1ARG 195
D
 SER 2ARG 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 7TCX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 11Right-handed 310
Helix 2
AA2
A
12 22Right-handed alpha
Helix 3
AA3
A
33 35Right-handed 310
Helix 4
AA4
A
39 47Right-handed alpha
Helix 5
AA5
A
64 83Right-handed alpha
Helix 6
AA6
A
111 127Right-handed alpha
Helix 7
AA7
A
139 143Right-handed 310
Helix 8
AA8
A
144 157Right-handed alpha
Helix 9
AA9
A
164 175Right-handed alpha
Helix 10
AB1
A
177 180Right-handed 310
Helix 11
AB2
A
181 188Right-handed alpha
Helix 12
AB3
A
215 225Right-handed alpha
Helix 13
AB4
A
225 230Right-handed alpha
Helix 14
AB5
A
245 260Right-handed alpha
Helix 15
AB6
B
9 11Right-handed 310
Helix 16
AB7
B
12 22Right-handed alpha
Helix 17
AB8
B
33 35Right-handed 310
Helix 18
AB9
B
39 47Right-handed alpha
Helix 19
AC1
B
64 83Right-handed alpha
Helix 20
AC2
B
108 110Right-handed 310
Helix 21
AC3
B
111 127Right-handed alpha
Helix 22
AC4
B
139 143Right-handed 310
Helix 23
AC5
B
144 157Right-handed alpha
Helix 24
AC6
B
164 175Right-handed alpha
Helix 25
AC7
B
177 180Right-handed 310
Helix 26
AC8
B
181 186Right-handed alpha
Helix 27
AC9
B
215 225Right-handed alpha
Helix 28
AD1
B
225 230Right-handed alpha
Helix 29
AD2
B
245 260Right-handed alpha
Helix 30
AD3
C
11 19Right-handed 310
Helix 31
AD4
C
24 28Right-handed 310
Helix 32
AD5
C
32 51Right-handed alpha
Helix 33
AD6
C
55 61Right-handed alpha
Helix 34
AD7
C
64 78Right-handed alpha
Helix 35
AD8
C
85 96Right-handed alpha
Helix 36
AD9
C
99 103Right-handed 310
Helix 37
AE1
C
104 123Right-handed alpha
Helix 38
AE2
D
11 16Right-handed alpha
Helix 39
AE3
D
17 19Right-handed 310
Helix 40
AE4
D
24 28Right-handed 310
Helix 41
AE5
D
32 53Right-handed alpha
Helix 42
AE6
D
54 61Right-handed alpha
Helix 43
AE7
D
64 78Right-handed alpha
Helix 44
AE8
D
85 96Right-handed alpha
Helix 45
AE9
D
99 103Right-handed 310
Helix 46
AF1
D
104 123Right-handed alpha
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There are 8 sheets in PDB entry 7TCX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 7first strand
Strand 2
A
27 31parallel
Strand 3
A
51 54parallel
Strand 4
A
87 90parallel
Strand 5
A
130 133parallel
Strand 6
A
159 163parallel
Strand 7
A
190 194parallel
Strand 8
A
235 239parallel
Strand 9
A
2 7parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 96first strand
Strand 2
A
99 106anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 199first strand
Strand 2
A
202 207anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 7first strand
Strand 2
B
27 31parallel
Strand 3
B
51 54parallel
Strand 4
B
87 90parallel
Strand 5
B
130 133parallel
Strand 6
B
159 163parallel
Strand 7
B
190 194parallel
Strand 8
B
235 239parallel
Strand 9
B
2 7parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 96first strand
Strand 2
B
99 106anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 199first strand
Strand 2
B
202 207anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 162first strand
Strand 2
C
141 146anti-parallel
Strand 3
C
130 135anti-parallel
Strand 4
C
174 179anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
158 162first strand
Strand 2
D
141 146anti-parallel
Strand 3
D
130 135anti-parallel
Strand 4
D
174 179anti-parallel
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