Analysis of interatomic Contacts of Structural Units in PDB entry:
7TDE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TDE entry

There are 2 chains in PDB entry 7TDE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 16GLN 690
B
 THR 16GLN 690
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 7TDE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 28Right-handed alpha
Helix 2
AA2
A
29 43Right-handed alpha
Helix 3
AA3
A
61 70Right-handed alpha
Helix 4
AA4
A
70 88Right-handed alpha
Helix 5
AA5
A
90 94Right-handed 310
Helix 6
AA6
A
116 137Right-handed alpha
Helix 7
AA7
A
138 143Right-handed alpha
Helix 8
AA8
A
143 150Right-handed alpha
Helix 9
AA9
A
150 173Right-handed alpha
Helix 10
AB1
A
186 199Right-handed alpha
Helix 11
AB2
A
199 238Right-handed alpha
Helix 12
AB3
A
241 247Right-handed alpha
Helix 13
AB4
A
250 263Right-handed alpha
Helix 14
AB5
A
268 270Right-handed 310
Helix 15
AB6
A
271 278Right-handed alpha
Helix 16
AB7
A
281 295Right-handed alpha
Helix 17
AB8
A
295 333Right-handed alpha
Helix 18
AB9
A
345 355Right-handed alpha
Helix 19
AC1
A
386 399Right-handed alpha
Helix 20
AC2
A
411 416Right-handed alpha
Helix 21
AC3
A
417 429Right-handed alpha
Helix 22
AC4
A
429 451Right-handed alpha
Helix 23
AC5
A
463 487Right-handed alpha
Helix 24
AC6
A
488 493Right-handed alpha
Helix 25
AC7
A
494 515Right-handed alpha
Helix 26
AC8
A
530 540Right-handed alpha
Helix 27
AC9
A
542 547Right-handed alpha
Helix 28
AD1
A
550 565Right-handed alpha
Helix 29
AD2
A
565 587Right-handed alpha
Helix 30
AD3
A
597 600Right-handed 310
Helix 31
AD4
A
601 607Right-handed alpha
Helix 32
AD5
A
615 629Right-handed alpha
Helix 33
AD6
A
632 644Right-handed alpha
Helix 34
AD7
A
645 647Right-handed 310
Helix 35
AD8
A
648 660Right-handed alpha
Helix 36
AD9
A
662 690Right-handed alpha
Helix 37
AE1
B
17 28Right-handed alpha
Helix 38
AE2
B
29 43Right-handed alpha
Helix 39
AE3
B
61 70Right-handed alpha
Helix 40
AE4
B
70 88Right-handed alpha
Helix 41
AE5
B
90 95Right-handed alpha
Helix 42
AE6
B
103 108Right-handed 310
Helix 43
AE7
B
116 137Right-handed alpha
Helix 44
AE8
B
137 143Right-handed alpha
Helix 45
AE9
B
143 150Right-handed alpha
Helix 46
AF1
B
150 173Right-handed alpha
Helix 47
AF2
B
186 199Right-handed alpha
Helix 48
AF3
B
199 238Right-handed alpha
Helix 49
AF4
B
241 247Right-handed alpha
Helix 50
AF5
B
250 263Right-handed alpha
Helix 51
AF6
B
268 270Right-handed 310
Helix 52
AF7
B
271 278Right-handed alpha
Helix 53
AF8
B
281 295Right-handed alpha
Helix 54
AF9
B
295 333Right-handed alpha
Helix 55
AG1
B
345 354Right-handed alpha
Helix 56
AG2
B
386 396Right-handed alpha
Helix 57
AG3
B
551 587Right-handed alpha
Helix 58
AG4
B
597 600Right-handed 310
Helix 59
AG5
B
601 606Right-handed alpha
Helix 60
AG6
B
615 628Right-handed alpha
Helix 61
AG7
B
632 644Right-handed alpha
Helix 62
AG8
B
645 647Right-handed 310
Helix 63
AG9
B
648 660Right-handed alpha
Helix 64
AH1
B
662 690Right-handed alpha
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There are no sheets in PDB entry 7TDE
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