Analysis of interatomic Contacts of Structural Units in PDB entry:
7TED

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TED entry

There are 9 chains in PDB entry 7TED (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 36	PHE 439
B	GLY 36	PHE 439
C	GLY 36	PHE 439
D	GLY 36	PHE 439
E	GLY 36	PHE 439
F	GLY 36	PHE 439
G	GLY 36	PHE 439
H	GLY 36	PHE 439
I	GLY 36	PHE 439

There are144 helices in PDB entry 7TED. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	39	51	Right-handed alpha
Helix 2	AA2	A	82	87	Right-handed 310
Helix 3	AA3	A	94	106	Right-handed alpha
Helix 4	AA4	A	119	132	Right-handed alpha
Helix 5	AA5	A	141	160	Right-handed alpha
Helix 6	AA6	A	181	187	Right-handed alpha
Helix 7	AA7	A	190	195	Right-handed alpha
Helix 8	AA8	A	211	219	Right-handed alpha
Helix 9	AA9	A	244	256	Right-handed alpha
Helix 10	AB1	A	276	282	Right-handed 310
Helix 11	AB2	A	291	295	Right-handed 310
Helix 12	AB3	A	307	312	Right-handed alpha
Helix 13	AB4	A	326	343	Right-handed alpha
Helix 14	AB5	A	344	361	Right-handed alpha
Helix 15	AB6	A	389	400	Right-handed alpha
Helix 16	AB7	A	421	438	Right-handed alpha
Helix 17	AB8	B	39	51	Right-handed alpha
Helix 18	AB9	B	82	87	Right-handed alpha
Helix 19	AC1	B	94	106	Right-handed alpha
Helix 20	AC2	B	119	132	Right-handed alpha
Helix 21	AC3	B	141	160	Right-handed alpha
Helix 22	AC4	B	181	187	Right-handed alpha
Helix 23	AC5	B	190	195	Right-handed alpha
Helix 24	AC6	B	211	219	Right-handed alpha
Helix 25	AC7	B	244	256	Right-handed alpha
Helix 26	AC8	B	276	282	Right-handed 310
Helix 27	AC9	B	291	295	Right-handed 310
Helix 28	AD1	B	307	312	Right-handed alpha
Helix 29	AD2	B	326	343	Right-handed alpha
Helix 30	AD3	B	344	361	Right-handed alpha
Helix 31	AD4	B	389	400	Right-handed alpha
Helix 32	AD5	B	421	438	Right-handed alpha
Helix 33	AD6	C	39	51	Right-handed alpha
Helix 34	AD7	C	82	87	Right-handed alpha
Helix 35	AD8	C	94	106	Right-handed alpha
Helix 36	AD9	C	119	132	Right-handed alpha
Helix 37	AE1	C	141	160	Right-handed alpha
Helix 38	AE2	C	181	187	Right-handed alpha
Helix 39	AE3	C	190	195	Right-handed alpha
Helix 40	AE4	C	211	219	Right-handed alpha
Helix 41	AE5	C	244	256	Right-handed alpha
Helix 42	AE6	C	276	282	Right-handed 310
Helix 43	AE7	C	291	295	Right-handed 310
Helix 44	AE8	C	307	312	Right-handed alpha
Helix 45	AE9	C	326	343	Right-handed alpha
Helix 46	AF1	C	344	361	Right-handed alpha
Helix 47	AF2	C	389	400	Right-handed alpha
Helix 48	AF3	C	421	438	Right-handed alpha
Helix 49	AF4	D	39	51	Right-handed alpha
Helix 50	AF5	D	82	87	Right-handed alpha
Helix 51	AF6	D	94	106	Right-handed alpha
Helix 52	AF7	D	119	132	Right-handed alpha
Helix 53	AF8	D	141	160	Right-handed alpha
Helix 54	AF9	D	181	186	Right-handed alpha
Helix 55	AG1	D	190	195	Right-handed alpha
Helix 56	AG2	D	211	219	Right-handed alpha
Helix 57	AG3	D	244	256	Right-handed alpha
Helix 58	AG4	D	276	282	Right-handed 310
Helix 59	AG5	D	291	295	Right-handed 310
Helix 60	AG6	D	307	312	Right-handed alpha
Helix 61	AG7	D	326	343	Right-handed alpha
Helix 62	AG8	D	344	361	Right-handed alpha
Helix 63	AG9	D	389	400	Right-handed alpha
Helix 64	AH1	D	421	438	Right-handed alpha
Helix 65	AH2	E	39	51	Right-handed alpha
Helix 66	AH3	E	82	87	Right-handed alpha
Helix 67	AH4	E	94	106	Right-handed alpha
Helix 68	AH5	E	119	132	Right-handed alpha
Helix 69	AH6	E	141	160	Right-handed alpha
Helix 70	AH7	E	181	186	Right-handed alpha
Helix 71	AH8	E	190	195	Right-handed alpha
Helix 72	AH9	E	211	219	Right-handed alpha
Helix 73	AI1	E	244	256	Right-handed alpha
Helix 74	AI2	E	276	282	Right-handed 310
Helix 75	AI3	E	291	295	Right-handed 310
Helix 76	AI4	E	307	312	Right-handed alpha
Helix 77	AI5	E	326	343	Right-handed alpha
Helix 78	AI6	E	344	361	Right-handed alpha
Helix 79	AI7	E	389	400	Right-handed alpha
Helix 80	AI8	E	421	438	Right-handed alpha
Helix 81	AI9	F	39	51	Right-handed alpha
Helix 82	AJ1	F	82	87	Right-handed alpha
Helix 83	AJ2	F	94	106	Right-handed alpha
Helix 84	AJ3	F	119	132	Right-handed alpha
Helix 85	AJ4	F	141	160	Right-handed alpha
Helix 86	AJ5	F	181	187	Right-handed alpha
Helix 87	AJ6	F	190	195	Right-handed alpha
Helix 88	AJ7	F	211	219	Right-handed alpha
Helix 89	AJ8	F	244	256	Right-handed alpha
Helix 90	AJ9	F	276	282	Right-handed 310
Helix 91	AK1	F	291	295	Right-handed 310
Helix 92	AK2	F	307	312	Right-handed alpha
Helix 93	AK3	F	326	343	Right-handed alpha
Helix 94	AK4	F	344	361	Right-handed alpha
Helix 95	AK5	F	389	400	Right-handed alpha
Helix 96	AK6	F	421	438	Right-handed alpha
Helix 97	AK7	G	39	51	Right-handed alpha
Helix 98	AK8	G	82	87	Right-handed alpha
Helix 99	AK9	G	94	106	Right-handed alpha
Helix 100	AL1	G	119	132	Right-handed alpha
Helix 101	AL2	G	141	160	Right-handed alpha
Helix 102	AL3	G	181	186	Right-handed alpha
Helix 103	AL4	G	190	195	Right-handed alpha
Helix 104	AL5	G	211	219	Right-handed alpha
Helix 105	AL6	G	244	256	Right-handed alpha
Helix 106	AL7	G	276	282	Right-handed 310
Helix 107	AL8	G	291	295	Right-handed 310
Helix 108	AL9	G	307	312	Right-handed alpha
Helix 109	AM1	G	326	343	Right-handed alpha
Helix 110	AM2	G	344	361	Right-handed alpha
Helix 111	AM3	G	389	400	Right-handed alpha
Helix 112	AM4	G	421	438	Right-handed alpha
Helix 113	AM5	H	39	51	Right-handed alpha
Helix 114	AM6	H	82	87	Right-handed alpha
Helix 115	AM7	H	94	106	Right-handed alpha
Helix 116	AM8	H	119	132	Right-handed alpha
Helix 117	AM9	H	141	160	Right-handed alpha
Helix 118	AN1	H	181	186	Right-handed alpha
Helix 119	AN2	H	190	195	Right-handed alpha
Helix 120	AN3	H	211	219	Right-handed alpha
Helix 121	AN4	H	244	256	Right-handed alpha
Helix 122	AN5	H	276	282	Right-handed 310
Helix 123	AN6	H	291	295	Right-handed 310
Helix 124	AN7	H	307	312	Right-handed alpha
Helix 125	AN8	H	326	343	Right-handed alpha
Helix 126	AN9	H	344	361	Right-handed alpha
Helix 127	AO1	H	389	400	Right-handed alpha
Helix 128	AO2	H	421	438	Right-handed alpha
Helix 129	AO3	I	39	51	Right-handed alpha
Helix 130	AO4	I	82	87	Right-handed alpha
Helix 131	AO5	I	94	106	Right-handed alpha
Helix 132	AO6	I	119	132	Right-handed alpha
Helix 133	AO7	I	141	160	Right-handed alpha
Helix 134	AO8	I	181	186	Right-handed alpha
Helix 135	AO9	I	190	195	Right-handed alpha
Helix 136	AP1	I	211	219	Right-handed alpha
Helix 137	AP2	I	244	256	Right-handed alpha
Helix 138	AP3	I	276	282	Right-handed 310
Helix 139	AP4	I	291	295	Right-handed 310
Helix 140	AP5	I	307	312	Right-handed alpha
Helix 141	AP6	I	326	343	Right-handed alpha
Helix 142	AP7	I	344	361	Right-handed alpha
Helix 143	AP8	I	389	400	Right-handed alpha
Helix 144	AP9	I	421	438	Right-handed alpha

There are 27 sheets in PDB entry 7TED. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	402	403	first strand
Strand 2	A	77	80	parallel
Strand 3	A	69	72	anti-parallel
Strand 4	A	61	66	anti-parallel
Strand 5	B	116	117	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	B	61	66	parallel
Strand 3	B	69	72	anti-parallel
Strand 4	B	77	80	anti-parallel
Strand 5	B	402	403	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	139	first strand
Strand 2	A	302	306	anti-parallel
Strand 3	A	287	290	anti-parallel
Strand 4	A	259	263	parallel
Strand 5	A	224	229	parallel
Strand 6	A	169	173	parallel
Strand 7	A	204	207	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	374	first strand
Strand 2	A	377	382	anti-parallel
Strand 3	A	411	414	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	139	first strand
Strand 2	B	302	306	anti-parallel
Strand 3	B	287	290	anti-parallel
Strand 4	B	259	263	parallel
Strand 5	B	224	229	parallel
Strand 6	B	169	173	parallel
Strand 7	B	204	207	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	374	first strand
Strand 2	B	377	382	anti-parallel
Strand 3	B	411	414	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	402	403	first strand
Strand 2	C	77	80	parallel
Strand 3	C	69	72	anti-parallel
Strand 4	C	61	66	anti-parallel
Strand 5	I	116	117	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	117	first strand
Strand 2	I	61	66	parallel
Strand 3	I	69	72	anti-parallel
Strand 4	I	77	80	anti-parallel
Strand 5	I	402	403	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	139	first strand
Strand 2	C	302	306	anti-parallel
Strand 3	C	287	290	anti-parallel
Strand 4	C	259	263	parallel
Strand 5	C	224	229	parallel
Strand 6	C	169	173	parallel
Strand 7	C	204	207	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	374	first strand
Strand 2	C	377	382	anti-parallel
Strand 3	C	411	414	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	66	first strand
Strand 2	D	69	72	anti-parallel
Strand 3	D	77	80	anti-parallel
Strand 4	D	402	403	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	139	first strand
Strand 2	D	302	306	anti-parallel
Strand 3	D	287	290	anti-parallel
Strand 4	D	259	263	parallel
Strand 5	D	224	229	parallel
Strand 6	D	169	173	parallel
Strand 7	D	204	207	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	374	first strand
Strand 2	D	377	382	anti-parallel
Strand 3	D	411	414	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	62	66	first strand
Strand 2	E	69	72	anti-parallel
Strand 3	E	77	80	anti-parallel
Strand 4	E	402	403	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	139	first strand
Strand 2	E	302	306	anti-parallel
Strand 3	E	287	290	anti-parallel
Strand 4	E	259	263	parallel
Strand 5	E	224	229	parallel
Strand 6	E	169	173	parallel
Strand 7	E	204	207	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	370	374	first strand
Strand 2	E	377	381	anti-parallel
Strand 3	E	411	414	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	62	66	first strand
Strand 2	F	69	72	anti-parallel
Strand 3	F	77	80	anti-parallel
Strand 4	F	402	403	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	139	first strand
Strand 2	F	302	306	anti-parallel
Strand 3	F	287	290	anti-parallel
Strand 4	F	259	263	parallel
Strand 5	F	224	229	parallel
Strand 6	F	169	173	parallel
Strand 7	F	204	207	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	368	374	first strand
Strand 2	F	377	382	anti-parallel
Strand 3	F	411	414	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	62	66	first strand
Strand 2	G	69	72	anti-parallel
Strand 3	G	77	80	anti-parallel
Strand 4	G	402	403	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	139	first strand
Strand 2	G	302	306	anti-parallel
Strand 3	G	287	290	anti-parallel
Strand 4	G	259	263	parallel
Strand 5	G	224	229	parallel
Strand 6	G	169	173	parallel
Strand 7	G	204	207	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	368	374	first strand
Strand 2	G	377	382	anti-parallel
Strand 3	G	411	414	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	62	66	first strand
Strand 2	H	69	72	anti-parallel
Strand 3	H	77	80	anti-parallel
Strand 4	H	402	403	parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	302	306	anti-parallel
Strand 3	H	287	290	anti-parallel
Strand 4	H	259	263	parallel
Strand 5	H	224	229	parallel
Strand 6	H	169	173	parallel
Strand 7	H	204	207	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	368	374	first strand
Strand 2	H	377	382	anti-parallel
Strand 3	H	411	414	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	135	139	first strand
Strand 2	I	302	306	anti-parallel
Strand 3	I	287	290	anti-parallel
Strand 4	I	259	263	parallel
Strand 5	I	224	229	parallel
Strand 6	I	169	173	parallel
Strand 7	I	204	207	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	368	374	first strand
Strand 2	I	377	382	anti-parallel
Strand 3	I	411	414	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TED

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TED