Analysis of interatomic Contacts of Structural Units in PDB entry:
7TER

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TER entry

There are 8 chains in PDB entry 7TER (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	ALA 862
B	SER 34	GLN 845
C	LYS 25	ALA 862
D	SER 34	GLN 845
H	LYS 3	CYS 221
L	ASP 1	ARG 215
M	LYS 3	CYS 221
N	ASP 1	ARG 215

There are120 helices in PDB entry 7TER. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	50	Right-handed alpha
Helix 2	AA2	A	70	82	Right-handed alpha
Helix 3	AA3	A	104	114	Right-handed alpha
Helix 4	AA4	A	125	130	Right-handed 310
Helix 5	AA5	A	145	155	Right-handed alpha
Helix 6	AA6	A	170	185	Right-handed alpha
Helix 7	AA7	A	227	234	Right-handed alpha
Helix 8	AA8	A	248	260	Right-handed alpha
Helix 9	AA9	A	276	283	Right-handed alpha
Helix 10	AB1	A	295	298	Right-handed 310
Helix 11	AB2	A	299	317	Right-handed alpha
Helix 12	AB3	A	337	348	Right-handed alpha
Helix 13	AB4	A	479	492	Right-handed alpha
Helix 14	AB5	A	521	528	Right-handed alpha
Helix 15	AB6	A	541	546	Right-handed alpha
Helix 16	AB7	A	584	602	Right-handed alpha
Helix 17	AB8	A	624	637	Right-handed alpha
Helix 18	AB9	A	647	675	Right-handed alpha
Helix 19	AC1	A	690	695	Right-handed alpha
Helix 20	AC2	A	708	717	Right-handed alpha
Helix 21	AC3	A	718	722	Right-handed 310
Helix 22	AC4	A	724	730	Right-handed alpha
Helix 23	AC5	A	734	744	Right-handed alpha
Helix 24	AC6	A	754	764	Right-handed alpha
Helix 25	AC7	A	789	803	Right-handed alpha
Helix 26	AC8	A	804	814	Right-handed alpha
Helix 27	AC9	A	834	862	Right-handed alpha
Helix 28	AD1	B	47	56	Right-handed alpha
Helix 29	AD2	B	58	62	Right-handed 310
Helix 30	AD3	B	77	92	Right-handed alpha
Helix 31	AD4	B	106	120	Right-handed alpha
Helix 32	AD5	B	127	132	Right-handed 310
Helix 33	AD6	B	138	142	Right-handed 310
Helix 34	AD7	B	149	165	Right-handed alpha
Helix 35	AD8	B	179	191	Right-handed alpha
Helix 36	AD9	B	212	219	Right-handed alpha
Helix 37	AE1	B	233	248	Right-handed alpha
Helix 38	AE2	B	288	311	Right-handed alpha
Helix 39	AE3	B	327	331	Right-handed 310
Helix 40	AE4	B	335	342	Right-handed alpha
Helix 41	AE5	B	459	473	Right-handed alpha
Helix 42	AE6	B	496	503	Right-handed alpha
Helix 43	AE7	B	516	521	Right-handed alpha
Helix 44	AE8	B	547	552	Right-handed 310
Helix 45	AE9	B	558	577	Right-handed alpha
Helix 46	AF1	B	604	614	Right-handed alpha
Helix 47	AF2	B	627	636	Right-handed alpha
Helix 48	AF3	B	637	656	Right-handed alpha
Helix 49	AF4	B	689	699	Right-handed alpha
Helix 50	AF5	B	701	706	Right-handed alpha
Helix 51	AF6	B	707	709	Right-handed 310
Helix 52	AF7	B	713	723	Right-handed alpha
Helix 53	AF8	B	733	743	Right-handed alpha
Helix 54	AF9	B	771	787	Right-handed alpha
Helix 55	AG1	B	788	795	Right-handed alpha
Helix 56	AG2	B	817	845	Right-handed alpha
Helix 57	AG3	C	36	50	Right-handed alpha
Helix 58	AG4	C	70	82	Right-handed alpha
Helix 59	AG5	C	104	114	Right-handed alpha
Helix 60	AG6	C	125	130	Right-handed 310
Helix 61	AG7	C	145	155	Right-handed alpha
Helix 62	AG8	C	170	185	Right-handed alpha
Helix 63	AG9	C	227	234	Right-handed alpha
Helix 64	AH1	C	248	260	Right-handed alpha
Helix 65	AH2	C	276	283	Right-handed alpha
Helix 66	AH3	C	295	298	Right-handed 310
Helix 67	AH4	C	299	317	Right-handed alpha
Helix 68	AH5	C	337	348	Right-handed alpha
Helix 69	AH6	C	479	492	Right-handed alpha
Helix 70	AH7	C	521	528	Right-handed alpha
Helix 71	AH8	C	541	546	Right-handed alpha
Helix 72	AH9	C	584	602	Right-handed alpha
Helix 73	AI1	C	624	637	Right-handed alpha
Helix 74	AI2	C	647	675	Right-handed alpha
Helix 75	AI3	C	690	695	Right-handed alpha
Helix 76	AI4	C	708	717	Right-handed alpha
Helix 77	AI5	C	718	722	Right-handed 310
Helix 78	AI6	C	724	730	Right-handed alpha
Helix 79	AI7	C	734	744	Right-handed alpha
Helix 80	AI8	C	754	764	Right-handed alpha
Helix 81	AI9	C	789	803	Right-handed alpha
Helix 82	AJ1	C	804	814	Right-handed alpha
Helix 83	AJ2	C	834	862	Right-handed alpha
Helix 84	AJ3	D	47	56	Right-handed alpha
Helix 85	AJ4	D	58	62	Right-handed 310
Helix 86	AJ5	D	77	92	Right-handed alpha
Helix 87	AJ6	D	106	120	Right-handed alpha
Helix 88	AJ7	D	127	132	Right-handed 310
Helix 89	AJ8	D	138	142	Right-handed 310
Helix 90	AJ9	D	149	165	Right-handed alpha
Helix 91	AK1	D	179	191	Right-handed alpha
Helix 92	AK2	D	212	219	Right-handed alpha
Helix 93	AK3	D	233	248	Right-handed alpha
Helix 94	AK4	D	288	311	Right-handed alpha
Helix 95	AK5	D	327	331	Right-handed 310
Helix 96	AK6	D	335	342	Right-handed alpha
Helix 97	AK7	D	459	473	Right-handed alpha
Helix 98	AK8	D	496	503	Right-handed alpha
Helix 99	AK9	D	516	521	Right-handed alpha
Helix 100	AL1	D	547	552	Right-handed 310
Helix 101	AL2	D	558	577	Right-handed alpha
Helix 102	AL3	D	604	614	Right-handed alpha
Helix 103	AL4	D	627	636	Right-handed alpha
Helix 104	AL5	D	637	656	Right-handed alpha
Helix 105	AL6	D	689	699	Right-handed alpha
Helix 106	AL7	D	701	706	Right-handed alpha
Helix 107	AL8	D	707	709	Right-handed 310
Helix 108	AL9	D	713	723	Right-handed alpha
Helix 109	AM1	D	733	743	Right-handed alpha
Helix 110	AM2	D	771	787	Right-handed alpha
Helix 111	AM3	D	788	795	Right-handed alpha
Helix 112	AM4	D	817	845	Right-handed alpha
Helix 113	AM5	H	28	32	Right-handed 310
Helix 114	AM6	H	190	194	Right-handed 310
Helix 115	AM7	L	125	130	Right-handed alpha
Helix 116	AM8	L	187	192	Right-handed alpha
Helix 117	AM9	M	28	32	Right-handed 310
Helix 118	AN1	M	190	194	Right-handed 310
Helix 119	AN2	N	125	130	Right-handed alpha
Helix 120	AN3	N	187	192	Right-handed alpha

There are 46 sheets in PDB entry 7TER. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	62	first strand
Strand 2	A	26	31	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	137	139	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	168	first strand
Strand 2	A	216	218	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	292	first strand
Strand 2	A	372	378	anti-parallel
Strand 3	A	381	389	anti-parallel
Strand 4	A	392	394	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	495	499	first strand
Strand 2	A	419	423	parallel
Strand 3	A	533	539	parallel
Strand 4	A	776	783	anti-parallel
Strand 5	A	555	564	anti-parallel
Strand 6	A	750	753	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	550	first strand
Strand 2	A	776	783	anti-parallel
Strand 3	A	555	564	anti-parallel
Strand 4	A	767	769	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	433	first strand
Strand 2	A	475	478	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	511	first strand
Strand 2	A	516	519	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	35	41	parallel
Strand 3	B	70	72	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	35	41	parallel
Strand 3	B	96	99	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	204	first strand
Strand 2	B	168	173	parallel
Strand 3	B	227	231	parallel
Strand 4	B	256	257	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	380	first strand
Strand 2	B	383	386	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	476	480	first strand
Strand 2	B	406	410	parallel
Strand 3	B	508	514	parallel
Strand 4	B	758	766	anti-parallel
Strand 5	B	530	539	anti-parallel
Strand 6	B	729	732	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	476	480	first strand
Strand 2	B	406	410	parallel
Strand 3	B	508	514	parallel
Strand 4	B	758	766	anti-parallel
Strand 5	B	530	539	anti-parallel
Strand 6	B	748	750	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	453	458	anti-parallel
Strand 3	B	434	438	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	490	first strand
Strand 2	B	493	494	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	62	first strand
Strand 2	C	26	31	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	168	first strand
Strand 2	C	216	218	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	292	first strand
Strand 2	C	372	378	anti-parallel
Strand 3	C	381	389	anti-parallel
Strand 4	C	392	394	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	495	499	first strand
Strand 2	C	419	423	parallel
Strand 3	C	533	539	parallel
Strand 4	C	776	783	anti-parallel
Strand 5	C	555	564	anti-parallel
Strand 6	C	750	753	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	549	550	first strand
Strand 2	C	776	783	anti-parallel
Strand 3	C	555	564	anti-parallel
Strand 4	C	767	769	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	430	433	first strand
Strand 2	C	475	478	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	508	511	first strand
Strand 2	C	516	519	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	67	first strand
Strand 2	D	35	41	parallel
Strand 3	D	70	72	parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	67	first strand
Strand 2	D	35	41	parallel
Strand 3	D	96	99	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	204	first strand
Strand 2	D	168	173	parallel
Strand 3	D	227	231	parallel
Strand 4	D	256	257	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	377	380	first strand
Strand 2	D	383	386	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	476	480	first strand
Strand 2	D	406	410	parallel
Strand 3	D	508	514	parallel
Strand 4	D	758	766	anti-parallel
Strand 5	D	530	539	anti-parallel
Strand 6	D	729	732	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	476	480	first strand
Strand 2	D	406	410	parallel
Strand 3	D	508	514	parallel
Strand 4	D	758	766	anti-parallel
Strand 5	D	530	539	anti-parallel
Strand 6	D	748	750	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	453	458	anti-parallel
Strand 3	D	434	438	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	490	first strand
Strand 2	D	493	494	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	7	first strand
Strand 2	H	18	24	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	113	117	parallel
Strand 3	H	93	95	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	58	59	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	126	130	first strand
Strand 2	H	144	151	anti-parallel
Strand 3	H	180	187	anti-parallel
Strand 4	H	169	177	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	157	159	first strand
Strand 2	H	200	205	anti-parallel
Strand 3	H	210	215	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	74	79	anti-parallel
Strand 4	L	66	69	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	13	first strand
Strand 2	L	106	110	parallel
Strand 3	L	89	90	anti-parallel
Strand 4	L	40	42	anti-parallel
Strand 5	L	49	50	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	119	122	first strand
Strand 2	L	133	143	anti-parallel
Strand 3	L	176	186	anti-parallel
Strand 4	L	163	171	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	157	159	first strand
Strand 2	L	149	154	anti-parallel
Strand 3	L	196	201	anti-parallel
Strand 4	L	211	213	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	4	7	first strand
Strand 2	M	18	24	anti-parallel
Strand 3	M	78	83	anti-parallel
Strand 4	M	68	73	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	12	first strand
Strand 2	M	113	117	parallel
Strand 3	M	93	95	anti-parallel
Strand 4	M	34	39	anti-parallel
Strand 5	M	45	51	anti-parallel
Strand 6	M	58	59	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	126	130	first strand
Strand 2	M	144	151	anti-parallel
Strand 3	M	180	187	anti-parallel
Strand 4	M	169	177	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	157	159	first strand
Strand 2	M	200	205	anti-parallel
Strand 3	M	210	215	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	4	7	first strand
Strand 2	N	19	25	anti-parallel
Strand 3	N	74	79	anti-parallel
Strand 4	N	66	69	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	11	13	first strand
Strand 2	N	106	110	parallel
Strand 3	N	89	90	anti-parallel
Strand 4	N	40	42	anti-parallel
Strand 5	N	49	50	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	119	122	first strand
Strand 2	N	133	143	anti-parallel
Strand 3	N	176	186	anti-parallel
Strand 4	N	163	171	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	157	159	first strand
Strand 2	N	149	154	anti-parallel
Strand 3	N	196	201	anti-parallel
Strand 4	N	211	213	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TER

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TER