Analysis of interatomic Contacts of Structural Units in PDB entry:
7TFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TFL entry

There are 6 chains in PDB entry 7TFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 292LYS 678
B
 LEU 5ALA 323
C
 ARG 8ASN 333
D
 GLN 24LEU 353
E
 MET 1ASP 354
I
 T 9 A 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 7TFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
297 302Right-handed alpha
Helix 2
AA2
A
306 310Right-handed 310
Helix 3
AA3
A
313 326Right-handed alpha
Helix 4
AA4
A
327 330Right-handed 310
Helix 5
AA5
A
358 370Right-handed alpha
Helix 6
AA6
A
426 430Right-handed 310
Helix 7
AA7
A
435 446Right-handed alpha
Helix 8
AA8
A
463 467Right-handed 310
Helix 9
AA9
A
481 495Right-handed alpha
Helix 10
AB1
A
502 511Right-handed alpha
Helix 11
AB2
A
513 528Right-handed alpha
Helix 12
AB3
A
535 543Right-handed alpha
Helix 13
AB4
A
550 559Right-handed alpha
Helix 14
AB5
A
565 572Right-handed alpha
Helix 15
AB6
A
573 582Right-handed alpha
Helix 16
AB7
A
587 596Right-handed alpha
Helix 17
AB8
A
597 599Right-handed 310
Helix 18
AB9
A
609 632Right-handed alpha
Helix 19
AC1
A
637 639Right-handed 310
Helix 20
AC2
A
640 649Right-handed alpha
Helix 21
AC3
A
650 656Right-handed alpha
Helix 22
AC4
A
668 678Right-handed alpha
Helix 23
AC5
B
10 15Right-handed alpha
Helix 24
AC6
B
26 40Right-handed alpha
Helix 25
AC7
B
56 67Right-handed alpha
Helix 26
AC8
B
70 74Right-handed alpha
Helix 27
AC9
B
87 99Right-handed alpha
Helix 28
AD1
B
120 134Right-handed alpha
Helix 29
AD2
B
151 158Right-handed alpha
Helix 30
AD3
B
167 183Right-handed alpha
Helix 31
AD4
B
187 198Right-handed alpha
Helix 32
AD5
B
201 216Right-handed alpha
Helix 33
AD6
B
220 228Right-handed alpha
Helix 34
AD7
B
231 242Right-handed alpha
Helix 35
AD8
B
244 257Right-handed alpha
Helix 36
AD9
B
262 277Right-handed alpha
Helix 37
AE1
B
281 301Right-handed alpha
Helix 38
AE2
B
305 321Right-handed alpha
Helix 39
AE3
C
14 19Right-handed alpha
Helix 40
AE4
C
23 27Right-handed 310
Helix 41
AE5
C
30 44Right-handed alpha
Helix 42
AE6
C
59 71Right-handed alpha
Helix 43
AE7
C
74 79Right-handed alpha
Helix 44
AE8
C
89 103Right-handed alpha
Helix 45
AE9
C
123 137Right-handed alpha
Helix 46
AF1
C
149 153Right-handed 310
Helix 47
AF2
C
154 161Right-handed alpha
Helix 48
AF3
C
170 186Right-handed alpha
Helix 49
AF4
C
190 200Right-handed alpha
Helix 50
AF5
C
204 219Right-handed alpha
Helix 51
AF6
C
228 237Right-handed alpha
Helix 52
AF7
C
240 254Right-handed alpha
Helix 53
AF8
C
255 271Right-handed alpha
Helix 54
AF9
C
273 286Right-handed alpha
Helix 55
AG1
C
293 313Right-handed alpha
Helix 56
AG2
C
315 332Right-handed alpha
Helix 57
AG3
D
26 31Right-handed alpha
Helix 58
AG4
D
43 55Right-handed alpha
Helix 59
AG5
D
70 84Right-handed alpha
Helix 60
AG6
D
86 92Right-handed alpha
Helix 61
AG7
D
102 116Right-handed alpha
Helix 62
AG8
D
122 127Right-handed 310
Helix 63
AG9
D
146 160Right-handed alpha
Helix 64
AH1
D
177 184Right-handed alpha
Helix 65
AH2
D
197 209Right-handed alpha
Helix 66
AH3
D
215 224Right-handed alpha
Helix 67
AH4
D
227 246Right-handed alpha
Helix 68
AH5
D
252 260Right-handed alpha
Helix 69
AH6
D
264 277Right-handed alpha
Helix 70
AH7
D
279 293Right-handed alpha
Helix 71
AH8
D
296 311Right-handed alpha
Helix 72
AH9
D
315 334Right-handed alpha
Helix 73
AI1
D
338 352Right-handed alpha
Helix 74
AI2
E
3 8Right-handed alpha
Helix 75
AI3
E
12 16Right-handed 310
Helix 76
AI4
E
19 32Right-handed alpha
Helix 77
AI5
E
48 61Right-handed alpha
Helix 78
AI6
E
104 117Right-handed alpha
Helix 79
AI7
E
142 146Right-handed 310
Helix 80
AI8
E
149 161Right-handed alpha
Helix 81
AI9
E
178 184Right-handed alpha
Helix 82
AJ1
E
194 209Right-handed alpha
Helix 83
AJ2
E
216 227Right-handed alpha
Helix 84
AJ3
E
229 244Right-handed alpha
Helix 85
AJ4
E
257 273Right-handed alpha
Helix 86
AJ5
E
275 292Right-handed alpha
Helix 87
AJ6
E
295 309Right-handed alpha
Helix 88
AJ7
E
314 334Right-handed alpha
Helix 89
AJ8
E
337 354Right-handed alpha
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There are 7 sheets in PDB entry 7TFL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 424first strand
Strand 2
A
452 455parallel
Strand 3
A
350 352parallel
Strand 4
A
472 474parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 46first strand
Strand 2
B
159 160parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 78first strand
Strand 2
B
109 114parallel
Strand 3
B
138 143parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 82first strand
Strand 2
C
112 116parallel
Strand 3
C
141 147parallel
Strand 4
C
49 52parallel
Strand 5
C
162 165parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
188 189first strand
Strand 2
C
226 227parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
93 95first strand
Strand 2
D
135 140parallel
Strand 3
D
164 169parallel
Strand 4
D
61 64parallel
Strand 5
D
185 188parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
69 76first strand
Strand 2
E
82 89anti-parallel
Strand 3
E
94 96anti-parallel
Strand 4
E
136 140parallel
Strand 5
E
165 170parallel
Strand 6
E
39 42parallel
Strand 7
E
186 189parallel
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