Analysis of interatomic Contacts of Structural Units in PDB entry:
7TH4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TH4 entry

There are 2 chains in PDB entry 7TH4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 291
B
 MET 1PRO 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7TH4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
24 39Right-handed alpha
Helix 3
AA3
A
40 42Right-handed 310
Helix 4
AA4
A
56 70Right-handed alpha
Helix 5
AA5
A
84 98Right-handed alpha
Helix 6
AA6
A
110 114Right-handed 310
Helix 7
AA7
A
126 139Right-handed alpha
Helix 8
AA8
A
140 142Right-handed 310
Helix 9
AA9
A
158 172Right-handed alpha
Helix 10
AB1
A
184 198Right-handed alpha
Helix 11
AB2
A
213 215Right-handed 310
Helix 12
AB3
A
216 223Right-handed alpha
Helix 13
AB4
A
229 239Right-handed alpha
Helix 14
AB5
A
242 264Right-handed alpha
Helix 15
AB6
A
278 287Right-handed alpha
Helix 16
AB7
B
2 9Right-handed alpha
Helix 17
AB8
B
24 39Right-handed alpha
Helix 18
AB9
B
40 42Right-handed 310
Helix 19
AC1
B
51 55Right-handed 310
Helix 20
AC2
B
56 70Right-handed alpha
Helix 21
AC3
B
84 98Right-handed alpha
Helix 22
AC4
B
126 139Right-handed alpha
Helix 23
AC5
B
140 142Right-handed 310
Helix 24
AC6
B
158 172Right-handed alpha
Helix 25
AC7
B
184 198Right-handed alpha
Helix 26
AC8
B
213 215Right-handed 310
Helix 27
AC9
B
216 223Right-handed alpha
Helix 28
AD1
B
229 239Right-handed alpha
Helix 29
AD2
B
242 264Right-handed alpha
Helix 30
AD3
B
278 287Right-handed alpha
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There are 3 sheets in PDB entry 7TH4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
14 19parallel
Strand 3
A
268 272parallel
Strand 4
A
204 208parallel
Strand 5
A
176 181parallel
Strand 6
A
143 148parallel
Strand 7
A
102 106parallel
Strand 8
A
76 79parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 48first strand
Strand 2
B
14 19parallel
Strand 3
B
268 272parallel
Strand 4
B
207 208parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 78first strand
Strand 2
B
102 105parallel
Strand 3
B
143 148parallel
Strand 4
B
176 179parallel
Strand 5
B
204 205parallel
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