Analysis of interatomic Contacts of Structural Units in PDB entry:
7TH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TH5 entry

There are 2 chains in PDB entry 7TH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 291
B
 MET 1PRO 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7TH5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
24 39Right-handed alpha
Helix 3
AA3
A
40 42Right-handed 310
Helix 4
AA4
A
56 70Right-handed alpha
Helix 5
AA5
A
84 98Right-handed alpha
Helix 6
AA6
A
126 139Right-handed alpha
Helix 7
AA7
A
140 142Right-handed 310
Helix 8
AA8
A
158 172Right-handed alpha
Helix 9
AA9
A
184 198Right-handed alpha
Helix 10
AB1
A
213 225Right-handed alpha
Helix 11
AB2
A
230 240Right-handed alpha
Helix 12
AB3
A
242 264Right-handed alpha
Helix 13
AB4
A
277 287Right-handed alpha
Helix 14
AB5
B
2 10Right-handed alpha
Helix 15
AB6
B
24 39Right-handed alpha
Helix 16
AB7
B
40 42Right-handed 310
Helix 17
AB8
B
56 70Right-handed alpha
Helix 18
AB9
B
84 98Right-handed alpha
Helix 19
AC1
B
126 139Right-handed alpha
Helix 20
AC2
B
140 142Right-handed 310
Helix 21
AC3
B
158 172Right-handed alpha
Helix 22
AC4
B
184 198Right-handed alpha
Helix 23
AC5
B
213 225Right-handed alpha
Helix 24
AC6
B
230 239Right-handed alpha
Helix 25
AC7
B
242 264Right-handed alpha
Helix 26
AC8
B
277 287Right-handed alpha
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There are 3 sheets in PDB entry 7TH5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
176 179parallel
Strand 3
A
143 148parallel
Strand 4
A
102 105parallel
Strand 5
A
74 78parallel
Strand 6
A
45 48parallel
Strand 7
A
14 19parallel
Strand 8
A
268 272parallel
Strand 9
A
207 208parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
B
227 229anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 19first strand
Strand 2
B
45 48parallel
Strand 3
B
74 78parallel
Strand 4
B
102 105parallel
Strand 5
B
143 148parallel
Strand 6
B
176 181parallel
Strand 7
B
204 208parallel
Strand 8
B
268 272parallel
Strand 9
B
14 19parallel
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