Analysis of interatomic Contacts of Structural Units in PDB entry:
7THH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7THH entry

There are 6 chains in PDB entry 7THH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 675	ASN 805
B	ASN 676	ASN 805
C	SER 675	ASN 805
D	SER 675	ASN 805
E	ASN 676	ASN 805
F	SER 675	PRO 804

There are 24 helices in PDB entry 7THH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	678	691	Right-handed alpha
Helix 2	AA2	A	734	744	Right-handed alpha
Helix 3	AA3	A	771	777	Right-handed alpha
Helix 4	AA4	A	792	796	Right-handed 310
Helix 5	AA5	B	678	691	Right-handed alpha
Helix 6	AA6	B	734	744	Right-handed alpha
Helix 7	AA7	B	771	777	Right-handed alpha
Helix 8	AA8	B	792	796	Right-handed 310
Helix 9	AA9	C	678	691	Right-handed alpha
Helix 10	AB1	C	734	744	Right-handed alpha
Helix 11	AB2	C	771	777	Right-handed alpha
Helix 12	AB3	C	792	796	Right-handed 310
Helix 13	AB4	D	678	691	Right-handed alpha
Helix 14	AB5	D	734	744	Right-handed alpha
Helix 15	AB6	D	771	777	Right-handed alpha
Helix 16	AB7	D	792	796	Right-handed 310
Helix 17	AB8	E	678	691	Right-handed alpha
Helix 18	AB9	E	734	744	Right-handed alpha
Helix 19	AC1	E	771	777	Right-handed alpha
Helix 20	AC2	E	792	796	Right-handed 310
Helix 21	AC3	F	678	691	Right-handed alpha
Helix 22	AC4	F	734	744	Right-handed alpha
Helix 23	AC5	F	771	777	Right-handed alpha
Helix 24	AC6	F	792	796	Right-handed 310

There are 16 sheets in PDB entry 7THH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	692	693	first strand
Strand 2	A	696	698	anti-parallel
Strand 3	A	706	712	anti-parallel
Strand 4	A	702	703	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	692	693	first strand
Strand 2	A	696	698	anti-parallel
Strand 3	A	706	712	anti-parallel
Strand 4	A	715	720	anti-parallel
Strand 5	A	725	728	anti-parallel
Strand 6	A	731	733	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	762	767	first strand
Strand 2	A	749	755	anti-parallel
Strand 3	A	799	802	parallel
Strand 4	A	779	781	anti-parallel
Strand 5	A	784	785	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	692	693	first strand
Strand 2	B	696	698	anti-parallel
Strand 3	B	706	712	anti-parallel
Strand 4	B	702	703	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	692	693	first strand
Strand 2	B	696	698	anti-parallel
Strand 3	B	706	712	anti-parallel
Strand 4	B	715	720	anti-parallel
Strand 5	B	725	728	anti-parallel
Strand 6	B	731	733	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	762	767	first strand
Strand 2	B	749	755	anti-parallel
Strand 3	B	799	802	parallel
Strand 4	B	779	781	anti-parallel
Strand 5	B	784	785	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	692	693	first strand
Strand 2	C	696	698	anti-parallel
Strand 3	C	706	712	anti-parallel
Strand 4	C	702	703	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	692	693	first strand
Strand 2	C	696	698	anti-parallel
Strand 3	C	706	712	anti-parallel
Strand 4	C	715	720	anti-parallel
Strand 5	C	725	728	anti-parallel
Strand 6	C	731	733	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	762	767	first strand
Strand 2	C	749	755	anti-parallel
Strand 3	C	799	802	parallel
Strand 4	C	779	781	anti-parallel
Strand 5	C	784	785	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	692	693	first strand
Strand 2	D	696	698	anti-parallel
Strand 3	D	706	712	anti-parallel
Strand 4	D	702	703	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	692	693	first strand
Strand 2	D	696	698	anti-parallel
Strand 3	D	706	712	anti-parallel
Strand 4	D	715	720	anti-parallel
Strand 5	D	725	728	anti-parallel
Strand 6	D	731	733	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	762	767	first strand
Strand 2	D	749	755	anti-parallel
Strand 3	D	799	802	parallel
Strand 4	D	779	781	anti-parallel
Strand 5	D	784	785	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	692	693	first strand
Strand 2	E	696	703	anti-parallel
Strand 3	E	706	712	anti-parallel
Strand 4	E	715	720	anti-parallel
Strand 5	E	725	728	anti-parallel
Strand 6	E	731	733	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	762	767	first strand
Strand 2	E	749	755	anti-parallel
Strand 3	E	799	802	parallel
Strand 4	E	779	781	anti-parallel
Strand 5	E	784	785	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	692	693	first strand
Strand 2	F	696	703	anti-parallel
Strand 3	F	706	712	anti-parallel
Strand 4	F	715	720	anti-parallel
Strand 5	F	725	728	anti-parallel
Strand 6	F	731	733	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	762	767	first strand
Strand 2	F	749	755	anti-parallel
Strand 3	F	799	802	parallel
Strand 4	F	779	781	anti-parallel
Strand 5	F	784	785	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7THH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7THH