Analysis of interatomic Contacts of Structural Units in PDB entry:
7THK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7THK entry

There are 3 chains in PDB entry 7THK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 26	SER 1147
B	PRO 26	SER 1147
C	PRO 26	SER 1147

There are 66 helices in PDB entry 7THK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	156	160	Right-handed 310
Helix 2	AA2	A	294	304	Right-handed alpha
Helix 3	AA3	A	619	624	Right-handed alpha
Helix 4	AA4	A	625	629	Right-handed 310
Helix 5	AA5	A	630	638	Right-handed alpha
Helix 6	AA6	A	737	744	Right-handed alpha
Helix 7	AA7	A	747	755	Right-handed alpha
Helix 8	AA8	A	758	783	Right-handed alpha
Helix 9	AA9	A	816	826	Right-handed alpha
Helix 10	AB1	A	838	842	Right-handed alpha
Helix 11	AB2	A	848	856	Right-handed alpha
Helix 12	AB3	A	866	885	Right-handed alpha
Helix 13	AB4	A	886	891	Right-handed alpha
Helix 14	AB5	A	897	909	Right-handed alpha
Helix 15	AB6	A	912	918	Right-handed alpha
Helix 16	AB7	A	919	940	Right-handed alpha
Helix 17	AB8	A	945	965	Right-handed alpha
Helix 18	AB9	A	966	968	Right-handed 310
Helix 19	AC1	A	976	984	Right-handed alpha
Helix 20	AC2	A	985	1032	Right-handed alpha
Helix 21	AC3	A	1140	1147	Right-handed alpha
Helix 22	AC4	B	156	160	Right-handed 310
Helix 23	AC5	B	294	304	Right-handed alpha
Helix 24	AC6	B	337	343	Right-handed alpha
Helix 25	AC7	B	366	371	Right-handed 310
Helix 26	AC8	B	384	390	Right-handed 310
Helix 27	AC9	B	404	410	Right-handed 310
Helix 28	AD1	B	416	421	Right-handed alpha
Helix 29	AD2	B	502	506	Right-handed 310
Helix 30	AD3	B	737	743	Right-handed alpha
Helix 31	AD4	B	746	755	Right-handed alpha
Helix 32	AD5	B	758	783	Right-handed alpha
Helix 33	AD6	B	816	826	Right-handed alpha
Helix 34	AD7	B	849	855	Right-handed alpha
Helix 35	AD8	B	866	885	Right-handed alpha
Helix 36	AD9	B	886	891	Right-handed alpha
Helix 37	AE1	B	897	910	Right-handed alpha
Helix 38	AE2	B	912	919	Right-handed alpha
Helix 39	AE3	B	919	941	Right-handed alpha
Helix 40	AE4	B	945	965	Right-handed alpha
Helix 41	AE5	B	966	968	Right-handed 310
Helix 42	AE6	B	976	984	Right-handed alpha
Helix 43	AE7	B	985	1032	Right-handed alpha
Helix 44	AE8	B	1140	1147	Right-handed alpha
Helix 45	AE9	C	156	160	Right-handed 310
Helix 46	AF1	C	294	304	Right-handed alpha
Helix 47	AF2	C	337	343	Right-handed alpha
Helix 48	AF3	C	365	371	Right-handed alpha
Helix 49	AF4	C	383	388	Right-handed 310
Helix 50	AF5	C	416	422	Right-handed alpha
Helix 51	AF6	C	502	505	Right-handed 310
Helix 52	AF7	C	737	742	Right-handed alpha
Helix 53	AF8	C	746	757	Right-handed alpha
Helix 54	AF9	C	757	783	Right-handed alpha
Helix 55	AG1	C	816	826	Right-handed alpha
Helix 56	AG2	C	850	855	Right-handed alpha
Helix 57	AG3	C	866	885	Right-handed alpha
Helix 58	AG4	C	886	891	Right-handed alpha
Helix 59	AG5	C	897	910	Right-handed alpha
Helix 60	AG6	C	913	919	Right-handed alpha
Helix 61	AG7	C	919	940	Right-handed alpha
Helix 62	AG8	C	945	965	Right-handed alpha
Helix 63	AG9	C	966	968	Right-handed 310
Helix 64	AH1	C	976	983	Right-handed alpha
Helix 65	AH2	C	985	1032	Right-handed alpha
Helix 66	AH3	C	1140	1147	Right-handed alpha

There are 39 sheets in PDB entry 7THK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	31	first strand
Strand 2	A	60	67	anti-parallel
Strand 3	A	263	269	anti-parallel
Strand 4	A	90	96	anti-parallel
Strand 5	A	187	197	anti-parallel
Strand 6	A	200	210	anti-parallel
Strand 7	A	224	229	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	B	565	567	parallel
Strand 3	B	573	577	anti-parallel
Strand 4	B	584	589	anti-parallel
Strand 5	B	546	554	anti-parallel
Strand 6	B	538	543	anti-parallel
Strand 7	B	324	328	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	242	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	131	anti-parallel
Strand 6	A	168	172	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	315	first strand
Strand 2	A	595	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	645	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	549	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	573	577	anti-parallel
Strand 6	A	565	567	anti-parallel
Strand 7	C	42	43	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	691	696	parallel
Strand 3	A	670	675	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	704	first strand
Strand 2	C	787	790	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1076	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	736	first strand
Strand 2	A	858	860	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	788	first strand
Strand 2	B	701	702	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1122	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1094	1098	first strand
Strand 2	A	1101	1105	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	31	first strand
Strand 2	B	60	67	anti-parallel
Strand 3	B	263	269	anti-parallel
Strand 4	B	90	96	anti-parallel
Strand 5	B	187	197	anti-parallel
Strand 6	B	200	210	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	C	565	567	parallel
Strand 3	C	573	577	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	546	554	anti-parallel
Strand 6	C	538	543	anti-parallel
Strand 7	C	325	328	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	242	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	116	121	anti-parallel
Strand 5	B	126	131	anti-parallel
Strand 6	B	168	172	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	643	645	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	392	402	anti-parallel
Strand 3	B	508	517	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	375	379	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	362	first strand
Strand 2	B	524	525	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	656	first strand
Strand 2	B	691	696	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	711	728	first strand
Strand 2	B	1059	1076	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	787	790	first strand
Strand 2	C	701	704	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1122	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1097	first strand
Strand 2	B	1102	1105	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	31	first strand
Strand 2	C	60	67	anti-parallel
Strand 3	C	263	269	anti-parallel
Strand 4	C	90	96	anti-parallel
Strand 5	C	187	197	anti-parallel
Strand 6	C	200	210	anti-parallel
Strand 7	C	224	230	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	55	first strand
Strand 2	C	271	278	anti-parallel
Strand 3	C	287	290	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	242	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	116	121	anti-parallel
Strand 5	C	126	131	anti-parallel
Strand 6	C	168	172	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	316	first strand
Strand 2	C	595	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	644	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	403	anti-parallel
Strand 3	C	507	515	anti-parallel
Strand 4	C	430	437	anti-parallel
Strand 5	C	376	380	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel
Strand 3	C	391	392	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	691	696	parallel
Strand 3	C	670	675	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1076	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	736	first strand
Strand 2	C	858	860	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1125	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1097	first strand
Strand 2	C	1102	1105	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7THK

Analysis of interatomic Contacts of Structural Units in PDB entry:
7THK