Analysis of interatomic Contacts of Structural Units in PDB entry:
7THN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7THN entry

There are 2 chains in PDB entry 7THN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 2GLU 494
E
 MET 1ALA 79
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7THN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
6 19Right-handed alpha
Helix 2
AA2
B
34 51Right-handed alpha
Helix 3
AA3
B
65 78Right-handed alpha
Helix 4
AA4
B
90 102Right-handed alpha
Helix 5
AA5
B
108 117Right-handed alpha
Helix 6
AA6
B
156 171Right-handed alpha
Helix 7
AA7
B
187 201Right-handed alpha
Helix 8
AA8
B
208 212Right-handed 310
Helix 9
AA9
B
214 226Right-handed alpha
Helix 10
AB1
B
233 243Right-handed alpha
Helix 11
AB2
B
265 273Right-handed alpha
Helix 12
AB3
B
274 276Right-handed 310
Helix 13
AB4
B
300 305Right-handed alpha
Helix 14
AB5
B
359 364Right-handed alpha
Helix 15
AB6
B
365 368Right-handed 310
Helix 16
AB7
B
403 411Right-handed alpha
Helix 17
AB8
B
446 456Right-handed alpha
Helix 18
AB9
B
459 463Right-handed 310
Helix 19
AC1
B
482 484Right-handed 310
Helix 20
AC2
B
485 494Right-handed alpha
Helix 21
AC3
E
2 15Right-handed alpha
Helix 22
AC4
E
35 37Right-handed 310
Helix 23
AC5
E
38 51Right-handed alpha
Helix 24
AC6
E
60 65Right-handed 310
Helix 25
AC7
E
66 78Right-handed alpha
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There are 7 sheets in PDB entry 7THN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 33first strand
Strand 2
B
23 27anti-parallel
Strand 3
B
203 206parallel
Strand 4
B
177 180parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 84first strand
Strand 2
B
57 60parallel
Strand 3
B
105 107parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 142first strand
Strand 2
B
150 155anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 232first strand
Strand 2
B
256 260parallel
Strand 3
B
281 286parallel
Strand 4
B
295 298anti-parallel
Strand 5
B
314 315anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 332first strand
Strand 2
B
320 324anti-parallel
Strand 3
B
339 346anti-parallel
Strand 4
B
370 380anti-parallel
Strand 5
B
383 389anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 396first strand
Strand 2
B
399 402anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
416 426first strand
Strand 2
B
429 438anti-parallel
Strand 3
B
466 469parallel
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