Analysis of interatomic Contacts of Structural Units in PDB entry:
7TIJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TIJ entry

There are 12 chains in PDB entry 7TIJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	PHE 375
B	ASP 1	PHE 375
C	ASP 1	PHE 375
D	ASP 1	PHE 375
E	ASP 1	PHE 375
F	ASP 1	PHE 375
G	GLU 319	ARG 357
H	GLU 319	ARG 357
I	GLU 319	ARG 357
J	GLU 319	ARG 357
K	GLU 319	ARG 357
L	GLU 319	ARG 357

There are114 helices in PDB entry 7TIJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	53	61	Right-handed alpha
Helix 2	AA2	A	79	93	Right-handed alpha
Helix 3	AA3	A	97	101	Right-handed 310
Helix 4	AA4	A	112	128	Right-handed alpha
Helix 5	AA5	A	136	146	Right-handed alpha
Helix 6	AA6	A	181	196	Right-handed alpha
Helix 7	AA7	A	202	217	Right-handed alpha
Helix 8	AA8	A	223	233	Right-handed alpha
Helix 9	AA9	A	252	257	Right-handed alpha
Helix 10	AB1	A	258	262	Right-handed 310
Helix 11	AB2	A	273	285	Right-handed alpha
Helix 12	AB3	A	288	296	Right-handed alpha
Helix 13	AB4	A	308	321	Right-handed alpha
Helix 14	AB5	A	337	348	Right-handed alpha
Helix 15	AB6	A	359	366	Right-handed alpha
Helix 16	AB7	A	367	372	Right-handed 310
Helix 17	AB8	B	53	61	Right-handed alpha
Helix 18	AB9	B	79	93	Right-handed alpha
Helix 19	AC1	B	97	101	Right-handed 310
Helix 20	AC2	B	112	128	Right-handed alpha
Helix 21	AC3	B	136	146	Right-handed alpha
Helix 22	AC4	B	181	196	Right-handed alpha
Helix 23	AC5	B	202	217	Right-handed alpha
Helix 24	AC6	B	223	233	Right-handed alpha
Helix 25	AC7	B	252	257	Right-handed alpha
Helix 26	AC8	B	258	262	Right-handed 310
Helix 27	AC9	B	273	285	Right-handed alpha
Helix 28	AD1	B	288	296	Right-handed alpha
Helix 29	AD2	B	308	321	Right-handed alpha
Helix 30	AD3	B	337	348	Right-handed alpha
Helix 31	AD4	B	359	366	Right-handed alpha
Helix 32	AD5	B	367	372	Right-handed 310
Helix 33	AD6	C	53	61	Right-handed alpha
Helix 34	AD7	C	79	93	Right-handed alpha
Helix 35	AD8	C	97	101	Right-handed 310
Helix 36	AD9	C	112	128	Right-handed alpha
Helix 37	AE1	C	136	146	Right-handed alpha
Helix 38	AE2	C	181	196	Right-handed alpha
Helix 39	AE3	C	202	217	Right-handed alpha
Helix 40	AE4	C	223	233	Right-handed alpha
Helix 41	AE5	C	252	257	Right-handed alpha
Helix 42	AE6	C	258	262	Right-handed 310
Helix 43	AE7	C	273	285	Right-handed alpha
Helix 44	AE8	C	288	296	Right-handed alpha
Helix 45	AE9	C	308	321	Right-handed alpha
Helix 46	AF1	C	337	348	Right-handed alpha
Helix 47	AF2	C	359	366	Right-handed alpha
Helix 48	AF3	C	367	372	Right-handed 310
Helix 49	AF4	D	53	61	Right-handed alpha
Helix 50	AF5	D	79	93	Right-handed alpha
Helix 51	AF6	D	97	101	Right-handed 310
Helix 52	AF7	D	112	128	Right-handed alpha
Helix 53	AF8	D	136	146	Right-handed alpha
Helix 54	AF9	D	181	196	Right-handed alpha
Helix 55	AG1	D	202	217	Right-handed alpha
Helix 56	AG2	D	223	233	Right-handed alpha
Helix 57	AG3	D	252	257	Right-handed alpha
Helix 58	AG4	D	258	262	Right-handed 310
Helix 59	AG5	D	273	285	Right-handed alpha
Helix 60	AG6	D	288	296	Right-handed alpha
Helix 61	AG7	D	308	321	Right-handed alpha
Helix 62	AG8	D	337	348	Right-handed alpha
Helix 63	AG9	D	359	366	Right-handed alpha
Helix 64	AH1	D	367	372	Right-handed 310
Helix 65	AH2	E	53	61	Right-handed alpha
Helix 66	AH3	E	79	93	Right-handed alpha
Helix 67	AH4	E	97	101	Right-handed 310
Helix 68	AH5	E	112	128	Right-handed alpha
Helix 69	AH6	E	136	146	Right-handed alpha
Helix 70	AH7	E	181	196	Right-handed alpha
Helix 71	AH8	E	202	217	Right-handed alpha
Helix 72	AH9	E	223	233	Right-handed alpha
Helix 73	AI1	E	252	257	Right-handed alpha
Helix 74	AI2	E	258	262	Right-handed 310
Helix 75	AI3	E	273	285	Right-handed alpha
Helix 76	AI4	E	288	296	Right-handed alpha
Helix 77	AI5	E	308	321	Right-handed alpha
Helix 78	AI6	E	337	348	Right-handed alpha
Helix 79	AI7	E	359	366	Right-handed alpha
Helix 80	AI8	E	367	372	Right-handed 310
Helix 81	AI9	F	53	61	Right-handed alpha
Helix 82	AJ1	F	79	93	Right-handed alpha
Helix 83	AJ2	F	97	101	Right-handed 310
Helix 84	AJ3	F	112	128	Right-handed alpha
Helix 85	AJ4	F	136	146	Right-handed alpha
Helix 86	AJ5	F	181	196	Right-handed alpha
Helix 87	AJ6	F	202	217	Right-handed alpha
Helix 88	AJ7	F	223	233	Right-handed alpha
Helix 89	AJ8	F	252	257	Right-handed alpha
Helix 90	AJ9	F	258	262	Right-handed 310
Helix 91	AK1	F	273	285	Right-handed alpha
Helix 92	AK2	F	288	296	Right-handed alpha
Helix 93	AK3	F	308	321	Right-handed alpha
Helix 94	AK4	F	337	348	Right-handed alpha
Helix 95	AK5	F	359	366	Right-handed alpha
Helix 96	AK6	F	367	372	Right-handed 310
Helix 97	AK7	G	320	326	Right-handed alpha
Helix 98	AK8	G	330	340	Right-handed alpha
Helix 99	AK9	G	344	357	Right-handed alpha
Helix 100	AL1	H	320	326	Right-handed alpha
Helix 101	AL2	H	330	340	Right-handed alpha
Helix 102	AL3	H	344	357	Right-handed alpha
Helix 103	AL4	I	320	326	Right-handed alpha
Helix 104	AL5	I	330	340	Right-handed alpha
Helix 105	AL6	I	344	357	Right-handed alpha
Helix 106	AL7	J	320	326	Right-handed alpha
Helix 107	AL8	J	330	340	Right-handed alpha
Helix 108	AL9	J	344	357	Right-handed alpha
Helix 109	AM1	K	320	326	Right-handed alpha
Helix 110	AM2	K	330	340	Right-handed alpha
Helix 111	AM3	K	344	357	Right-handed alpha
Helix 112	AM4	L	320	326	Right-handed alpha
Helix 113	AM5	L	330	340	Right-handed alpha
Helix 114	AM6	L	344	357	Right-handed alpha

There are 18 sheets in PDB entry 7TIJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	32	first strand
Strand 2	A	16	21	anti-parallel
Strand 3	A	8	11	anti-parallel
Strand 4	A	103	106	parallel
Strand 5	A	131	135	parallel
Strand 6	A	357	358	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	154	first strand
Strand 2	A	297	300	parallel
Strand 3	A	329	330	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	241	first strand
Strand 2	A	247	248	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	32	first strand
Strand 2	B	16	21	anti-parallel
Strand 3	B	8	11	anti-parallel
Strand 4	B	103	106	parallel
Strand 5	B	131	135	parallel
Strand 6	B	357	358	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	154	first strand
Strand 2	B	297	300	parallel
Strand 3	B	329	330	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	241	first strand
Strand 2	B	247	248	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	32	first strand
Strand 2	C	16	21	anti-parallel
Strand 3	C	8	11	anti-parallel
Strand 4	C	103	106	parallel
Strand 5	C	131	135	parallel
Strand 6	C	357	358	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	154	first strand
Strand 2	C	297	300	parallel
Strand 3	C	329	330	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	241	first strand
Strand 2	C	247	248	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	32	first strand
Strand 2	D	16	21	anti-parallel
Strand 3	D	8	11	anti-parallel
Strand 4	D	103	106	parallel
Strand 5	D	131	135	parallel
Strand 6	D	357	358	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	154	first strand
Strand 2	D	297	300	parallel
Strand 3	D	329	330	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	241	first strand
Strand 2	D	247	248	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	32	first strand
Strand 2	E	16	21	anti-parallel
Strand 3	E	8	11	anti-parallel
Strand 4	E	103	106	parallel
Strand 5	E	131	135	parallel
Strand 6	E	357	358	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	154	first strand
Strand 2	E	297	300	parallel
Strand 3	E	329	330	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	241	first strand
Strand 2	E	247	248	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	32	first strand
Strand 2	F	16	21	anti-parallel
Strand 3	F	8	11	anti-parallel
Strand 4	F	103	106	parallel
Strand 5	F	131	135	parallel
Strand 6	F	357	358	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	152	154	first strand
Strand 2	F	297	300	parallel
Strand 3	F	329	330	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	240	241	first strand
Strand 2	F	247	248	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TIJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TIJ