Analysis of interatomic Contacts of Structural Units in PDB entry:
7TIN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TIN entry

There are 4 chains in PDB entry 7TIN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	THR 556
B	GLY 2	LEU 557
C	GLY 2	LEU 557
D	GLY 2	HIS 554

There are122 helices in PDB entry 7TIN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	22	Right-handed alpha
Helix 2	AA2	A	35	45	Right-handed alpha
Helix 3	AA3	A	55	71	Right-handed alpha
Helix 4	AA4	A	81	86	Right-handed alpha
Helix 5	AA5	A	87	98	Right-handed alpha
Helix 6	AA6	A	109	113	Right-handed 310
Helix 7	AA7	A	143	159	Right-handed alpha
Helix 8	AA8	A	185	189	Right-handed 310
Helix 9	AA9	A	205	207	Right-handed 310
Helix 10	AB1	A	208	213	Right-handed alpha
Helix 11	AB2	A	229	240	Right-handed alpha
Helix 12	AB3	A	247	250	Right-handed 310
Helix 13	AB4	A	251	255	Right-handed 310
Helix 14	AB5	A	262	269	Right-handed alpha
Helix 15	AB6	A	287	295	Right-handed alpha
Helix 16	AB7	A	324	334	Right-handed alpha
Helix 17	AB8	A	340	365	Right-handed alpha
Helix 18	AB9	A	367	379	Right-handed alpha
Helix 19	AC1	A	390	400	Right-handed alpha
Helix 20	AC2	A	418	428	Right-handed alpha
Helix 21	AC3	A	438	444	Right-handed alpha
Helix 22	AC4	A	445	447	Right-handed 310
Helix 23	AC5	A	448	455	Right-handed alpha
Helix 24	AC6	A	468	474	Right-handed 310
Helix 25	AC7	A	475	480	Right-handed alpha
Helix 26	AC8	A	480	488	Right-handed alpha
Helix 27	AC9	A	495	503	Right-handed alpha
Helix 28	AD1	A	512	519	Right-handed alpha
Helix 29	AD2	A	534	548	Right-handed alpha
Helix 30	AD3	A	549	555	Right-handed alpha
Helix 31	AD4	B	3	22	Right-handed alpha
Helix 32	AD5	B	35	45	Right-handed alpha
Helix 33	AD6	B	55	71	Right-handed alpha
Helix 34	AD7	B	81	86	Right-handed alpha
Helix 35	AD8	B	87	98	Right-handed alpha
Helix 36	AD9	B	109	113	Right-handed 310
Helix 37	AE1	B	143	159	Right-handed alpha
Helix 38	AE2	B	185	189	Right-handed 310
Helix 39	AE3	B	205	207	Right-handed 310
Helix 40	AE4	B	208	213	Right-handed alpha
Helix 41	AE5	B	229	240	Right-handed alpha
Helix 42	AE6	B	247	250	Right-handed 310
Helix 43	AE7	B	262	269	Right-handed alpha
Helix 44	AE8	B	287	297	Right-handed alpha
Helix 45	AE9	B	324	332	Right-handed alpha
Helix 46	AF1	B	333	335	Right-handed 310
Helix 47	AF2	B	340	365	Right-handed alpha
Helix 48	AF3	B	367	379	Right-handed alpha
Helix 49	AF4	B	390	400	Right-handed alpha
Helix 50	AF5	B	418	428	Right-handed alpha
Helix 51	AF6	B	438	444	Right-handed alpha
Helix 52	AF7	B	445	447	Right-handed 310
Helix 53	AF8	B	448	455	Right-handed alpha
Helix 54	AF9	B	468	474	Right-handed 310
Helix 55	AG1	B	475	480	Right-handed alpha
Helix 56	AG2	B	483	488	Right-handed alpha
Helix 57	AG3	B	496	503	Right-handed alpha
Helix 58	AG4	B	512	518	Right-handed alpha
Helix 59	AG5	B	534	546	Right-handed alpha
Helix 60	AG6	B	547	548	Right-handed 310
Helix 61	AG7	B	549	553	Right-handed 310
Helix 62	AG8	C	3	22	Right-handed alpha
Helix 63	AG9	C	35	45	Right-handed alpha
Helix 64	AH1	C	55	71	Right-handed alpha
Helix 65	AH2	C	81	86	Right-handed alpha
Helix 66	AH3	C	87	98	Right-handed alpha
Helix 67	AH4	C	109	113	Right-handed 310
Helix 68	AH5	C	143	158	Right-handed alpha
Helix 69	AH6	C	159	161	Right-handed 310
Helix 70	AH7	C	185	189	Right-handed 310
Helix 71	AH8	C	205	207	Right-handed 310
Helix 72	AH9	C	208	213	Right-handed alpha
Helix 73	AI1	C	229	240	Right-handed alpha
Helix 74	AI2	C	247	250	Right-handed 310
Helix 75	AI3	C	251	255	Right-handed 310
Helix 76	AI4	C	262	269	Right-handed alpha
Helix 77	AI5	C	287	295	Right-handed alpha
Helix 78	AI6	C	324	332	Right-handed alpha
Helix 79	AI7	C	340	365	Right-handed alpha
Helix 80	AI8	C	367	379	Right-handed alpha
Helix 81	AI9	C	390	400	Right-handed alpha
Helix 82	AJ1	C	418	428	Right-handed alpha
Helix 83	AJ2	C	438	444	Right-handed alpha
Helix 84	AJ3	C	445	447	Right-handed 310
Helix 85	AJ4	C	448	455	Right-handed alpha
Helix 86	AJ5	C	468	474	Right-handed 310
Helix 87	AJ6	C	475	480	Right-handed alpha
Helix 88	AJ7	C	480	488	Right-handed alpha
Helix 89	AJ8	C	496	503	Right-handed alpha
Helix 90	AJ9	C	512	518	Right-handed alpha
Helix 91	AK1	C	534	547	Right-handed alpha
Helix 92	AK2	C	549	557	Right-handed alpha
Helix 93	AK3	D	3	22	Right-handed alpha
Helix 94	AK4	D	35	45	Right-handed alpha
Helix 95	AK5	D	55	71	Right-handed alpha
Helix 96	AK6	D	81	86	Right-handed alpha
Helix 97	AK7	D	87	98	Right-handed alpha
Helix 98	AK8	D	143	159	Right-handed alpha
Helix 99	AK9	D	160	161	Right-handed 310
Helix 100	AL1	D	162	166	Right-handed 310
Helix 101	AL2	D	185	189	Right-handed 310
Helix 102	AL3	D	205	207	Right-handed 310
Helix 103	AL4	D	208	213	Right-handed alpha
Helix 104	AL5	D	229	240	Right-handed alpha
Helix 105	AL6	D	247	250	Right-handed 310
Helix 106	AL7	D	251	255	Right-handed 310
Helix 107	AL8	D	262	269	Right-handed alpha
Helix 108	AL9	D	287	295	Right-handed alpha
Helix 109	AM1	D	324	333	Right-handed alpha
Helix 110	AM2	D	340	365	Right-handed alpha
Helix 111	AM3	D	367	379	Right-handed alpha
Helix 112	AM4	D	390	400	Right-handed alpha
Helix 113	AM5	D	418	430	Right-handed alpha
Helix 114	AM6	D	438	444	Right-handed alpha
Helix 115	AM7	D	445	447	Right-handed 310
Helix 116	AM8	D	448	455	Right-handed alpha
Helix 117	AM9	D	468	478	Right-handed 310
Helix 118	AN1	D	480	482	Right-handed 310
Helix 119	AN2	D	483	488	Right-handed alpha
Helix 120	AN3	D	496	503	Right-handed alpha
Helix 121	AN4	D	512	518	Right-handed alpha
Helix 122	AN5	D	534	546	Right-handed alpha

There are 14 sheets in PDB entry 7TIN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	52	first strand
Strand 2	A	26	29	parallel
Strand 3	A	74	78	parallel
Strand 4	A	101	107	parallel
Strand 5	A	169	174	parallel
Strand 6	A	133	136	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	203	first strand
Strand 2	D	199	203	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	260	first strand
Strand 2	A	243	245	parallel
Strand 3	A	217	221	parallel
Strand 4	A	277	281	parallel
Strand 5	A	300	305	parallel
Strand 6	A	319	322	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	406	408	first strand
Strand 2	A	384	387	parallel
Strand 3	A	432	437	parallel
Strand 4	A	459	464	parallel
Strand 5	A	527	532	parallel
Strand 6	A	506	510	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	52	first strand
Strand 2	B	26	29	parallel
Strand 3	B	74	78	parallel
Strand 4	B	101	107	parallel
Strand 5	B	169	174	parallel
Strand 6	B	133	136	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	203	first strand
Strand 2	C	199	202	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	260	first strand
Strand 2	B	243	245	parallel
Strand 3	B	217	221	parallel
Strand 4	B	277	281	parallel
Strand 5	B	300	305	parallel
Strand 6	B	319	322	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	408	first strand
Strand 2	B	384	387	parallel
Strand 3	B	432	437	parallel
Strand 4	B	460	464	parallel
Strand 5	B	527	532	parallel
Strand 6	B	506	510	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	52	first strand
Strand 2	C	26	29	parallel
Strand 3	C	74	78	parallel
Strand 4	C	101	107	parallel
Strand 5	C	169	174	parallel
Strand 6	C	133	136	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	260	first strand
Strand 2	C	243	245	parallel
Strand 3	C	217	221	parallel
Strand 4	C	277	281	parallel
Strand 5	C	300	305	parallel
Strand 6	C	319	322	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	406	408	first strand
Strand 2	C	384	387	parallel
Strand 3	C	432	437	parallel
Strand 4	C	459	464	parallel
Strand 5	C	527	532	parallel
Strand 6	C	506	510	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	49	52	first strand
Strand 2	D	26	29	parallel
Strand 3	D	74	78	parallel
Strand 4	D	101	107	parallel
Strand 5	D	169	174	parallel
Strand 6	D	133	136	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	260	first strand
Strand 2	D	243	245	parallel
Strand 3	D	217	221	parallel
Strand 4	D	277	281	parallel
Strand 5	D	300	305	parallel
Strand 6	D	319	322	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	406	408	first strand
Strand 2	D	384	387	parallel
Strand 3	D	432	437	parallel
Strand 4	D	459	464	parallel
Strand 5	D	527	532	parallel
Strand 6	D	506	510	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TIN

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TIN