Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TJ4 entry

There are 4 chains in PDB entry 7TJ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -7THR 479
B
 MET -1ALA 291
C
 GLU -7THR 479
D
 MET -1SER 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7TJ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-7 -3Right-handed 310
Helix 2
AA2
A
368 380Right-handed alpha
Helix 3
AA3
A
382 396Right-handed alpha
Helix 4
AA4
A
400 415Right-handed alpha
Helix 5
AA5
A
416 431Right-handed alpha
Helix 6
AA6
A
434 448Right-handed alpha
Helix 7
AA7
A
450 465Right-handed alpha
Helix 8
AA8
A
468 479Right-handed alpha
Helix 9
AA9
B
144 163Right-handed alpha
Helix 10
AB1
B
179 183Right-handed 310
Helix 11
AB2
B
211 213Right-handed 310
Helix 12
AB3
B
214 229Right-handed alpha
Helix 13
AB4
B
241 246Right-handed alpha
Helix 14
AB5
B
261 269Right-handed alpha
Helix 15
AB6
B
270 289Right-handed alpha
Helix 16
AB7
C
368 380Right-handed alpha
Helix 17
AB8
C
382 396Right-handed alpha
Helix 18
AB9
C
400 415Right-handed alpha
Helix 19
AC1
C
416 431Right-handed alpha
Helix 20
AC2
C
434 448Right-handed alpha
Helix 21
AC3
C
450 465Right-handed alpha
Helix 22
AC4
C
468 479Right-handed alpha
Helix 23
AC5
D
144 163Right-handed alpha
Helix 24
AC6
D
179 183Right-handed 310
Helix 25
AC7
D
211 213Right-handed 310
Helix 26
AC8
D
214 227Right-handed alpha
Helix 27
AC9
D
241 246Right-handed alpha
Helix 28
AD1
D
261 269Right-handed alpha
Helix 29
AD2
D
270 290Right-handed alpha
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There are 2 sheets in PDB entry 7TJ4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 169first strand
Strand 2
B
121 126parallel
Strand 3
B
188 193parallel
Strand 4
B
251 256parallel
Strand 5
B
205 209anti-parallel
Strand 6
B
233 238parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
166 169first strand
Strand 2
D
121 126parallel
Strand 3
D
188 195parallel
Strand 4
D
251 258parallel
Strand 5
D
205 209anti-parallel
Strand 6
D
233 238parallel
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