Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TJ9 entry

There are 2 chains in PDB entry 7TJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 99LYS 1504
B
 VAL 25LYS 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 7TJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
105 116Right-handed alpha
Helix 2
AA2
A
117 136Right-handed alpha
Helix 3
AA3
A
143 167Right-handed alpha
Helix 4
AA4
A
178 196Right-handed alpha
Helix 5
AA5
A
201 211Right-handed alpha
Helix 6
AA6
A
212 217Right-handed 310
Helix 7
AA7
A
220 237Right-handed alpha
Helix 8
AA8
A
237 260Right-handed alpha
Helix 9
AA9
A
261 263Right-handed 310
Helix 10
AB1
A
329 333Right-handed 310
Helix 11
AB2
A
340 351Right-handed alpha
Helix 12
AB3
A
354 366Right-handed alpha
Helix 13
AB4
A
367 369Right-handed 310
Helix 14
AB5
A
370 382Right-handed alpha
Helix 15
AB6
A
383 404Right-handed alpha
Helix 16
AB7
A
507 524Right-handed alpha
Helix 17
AB8
A
531 559Right-handed alpha
Helix 18
AB9
A
560 565Right-handed alpha
Helix 19
AC1
A
567 585Right-handed alpha
Helix 20
AC2
A
595 609Right-handed 310
Helix 21
AC3
A
610 656Right-handed alpha
Helix 22
AC4
A
657 660Right-handed 310
Helix 23
AC5
A
673 686Right-handed alpha
Helix 24
AC6
A
690 700Right-handed alpha
Helix 25
AC7
A
701 733Right-handed alpha
Helix 26
AC8
A
922 933Right-handed alpha
Helix 27
AC9
A
933 950Right-handed alpha
Helix 28
AD1
A
951 954Right-handed 310
Helix 29
AD2
A
961 991Right-handed alpha
Helix 30
AD3
A
991 997Right-handed alpha
Helix 31
AD4
A
998 1017Right-handed alpha
Helix 32
AD5
A
1023 1034Right-handed 310
Helix 33
AD6
A
1035 1041Right-handed alpha
Helix 34
AD7
A
1041 1056Right-handed alpha
Helix 35
AD8
A
1058 1081Right-handed alpha
Helix 36
AD9
A
1103 1109Right-handed alpha
Helix 37
AE1
A
1127 1140Right-handed alpha
Helix 38
AE2
A
1143 1152Right-handed alpha
Helix 39
AE3
A
1166 1168Right-handed 310
Helix 40
AE4
A
1169 1180Right-handed alpha
Helix 41
AE5
A
1181 1204Right-handed alpha
Helix 42
AE6
A
1211 1225Right-handed alpha
Helix 43
AE7
A
1245 1250Right-handed alpha
Helix 44
AE8
A
1250 1269Right-handed alpha
Helix 45
AE9
A
1276 1305Right-handed alpha
Helix 46
AF1
A
1312 1335Right-handed alpha
Helix 47
AF2
A
1343 1351Right-handed alpha
Helix 48
AF3
A
1352 1358Right-handed 310
Helix 49
AF4
A
1363 1403Right-handed alpha
Helix 50
AF5
A
1419 1432Right-handed alpha
Helix 51
AF6
A
1435 1444Right-handed alpha
Helix 52
AF7
A
1445 1447Right-handed 310
Helix 53
AF8
A
1468 1503Right-handed alpha
Helix 54
AF9
B
152 186Right-handed alpha
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There are 4 sheets in PDB entry 7TJ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 269first strand
Strand 2
A
320 324anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1086 1088first strand
Strand 2
A
1117 1119anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 43first strand
Strand 2
B
105 107anti-parallel
Strand 3
B
92 94anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 77first strand
Strand 2
B
56 65anti-parallel
Strand 3
B
116 126anti-parallel
Strand 4
B
134 143anti-parallel
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