Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TJH entry

There are 9 chains in PDB entry 7TJH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 356	LEU 914
B	SER 235	LYS 497
C	ALA 16	ILE 616
D	ASP 46	LEU 529
E	MET 1	HIS 478
F	SER 271	MET 427
G	T 21	A 61
H	T 24	A 64
I	SER 53	LEU 512

There are150 helices in PDB entry 7TJH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	374	378	Right-handed 310
Helix 2	AA2	A	387	391	Right-handed 310
Helix 3	AA3	A	406	409	Right-handed 310
Helix 4	AA4	A	423	430	Right-handed alpha
Helix 5	AA5	A	453	469	Right-handed alpha
Helix 6	AA6	A	484	501	Right-handed alpha
Helix 7	AA7	A	522	534	Right-handed alpha
Helix 8	AA8	A	538	553	Right-handed alpha
Helix 9	AA9	A	554	558	Right-handed 310
Helix 10	AB1	A	567	572	Right-handed 310
Helix 11	AB2	A	576	585	Right-handed alpha
Helix 12	AB3	A	586	588	Right-handed 310
Helix 13	AB4	A	603	608	Right-handed alpha
Helix 14	AB5	A	610	618	Right-handed alpha
Helix 15	AB6	A	628	640	Right-handed alpha
Helix 16	AB7	A	685	700	Right-handed alpha
Helix 17	AB8	A	702	726	Right-handed alpha
Helix 18	AB9	A	774	785	Right-handed alpha
Helix 19	AC1	A	789	795	Right-handed alpha
Helix 20	AC2	A	798	816	Right-handed alpha
Helix 21	AC3	A	822	836	Right-handed alpha
Helix 22	AC4	A	839	852	Right-handed alpha
Helix 23	AC5	A	865	876	Right-handed alpha
Helix 24	AC6	A	897	908	Right-handed alpha
Helix 25	AC7	A	910	914	Right-handed 310
Helix 26	AC8	B	241	250	Right-handed alpha
Helix 27	AC9	B	262	266	Right-handed 310
Helix 28	AD1	B	270	285	Right-handed alpha
Helix 29	AD2	B	286	298	Right-handed alpha
Helix 30	AD3	B	300	310	Right-handed alpha
Helix 31	AD4	B	322	333	Right-handed alpha
Helix 32	AD5	B	333	342	Right-handed alpha
Helix 33	AD6	B	371	384	Right-handed alpha
Helix 34	AD7	B	398	412	Right-handed alpha
Helix 35	AD8	B	434	447	Right-handed alpha
Helix 36	AD9	B	460	465	Right-handed 310
Helix 37	AE1	B	466	474	Right-handed alpha
Helix 38	AE2	B	486	491	Right-handed alpha
Helix 39	AE3	C	44	48	Right-handed 310
Helix 40	AE4	C	50	93	Right-handed alpha
Helix 41	AE5	C	138	158	Right-handed alpha
Helix 42	AE6	C	185	190	Right-handed alpha
Helix 43	AE7	C	190	196	Right-handed alpha
Helix 44	AE8	C	207	211	Right-handed 310
Helix 45	AE9	C	212	224	Right-handed alpha
Helix 46	AF1	C	225	229	Right-handed 310
Helix 47	AF2	C	243	250	Right-handed alpha
Helix 48	AF3	C	252	260	Right-handed alpha
Helix 49	AF4	C	271	273	Right-handed 310
Helix 50	AF5	C	274	288	Right-handed alpha
Helix 51	AF6	C	295	308	Right-handed alpha
Helix 52	AF7	C	312	332	Right-handed alpha
Helix 53	AF8	C	333	339	Right-handed 310
Helix 54	AF9	C	341	346	Right-handed 310
Helix 55	AG1	C	347	355	Right-handed alpha
Helix 56	AG2	C	357	370	Right-handed alpha
Helix 57	AG3	C	386	395	Right-handed alpha
Helix 58	AG4	C	401	416	Right-handed alpha
Helix 59	AG5	C	423	434	Right-handed alpha
Helix 60	AG6	C	435	441	Right-handed alpha
Helix 61	AG7	C	446	450	Right-handed 310
Helix 62	AG8	C	473	480	Right-handed alpha
Helix 63	AG9	C	482	493	Right-handed alpha
Helix 64	AH1	C	494	497	Right-handed 310
Helix 65	AH2	C	511	517	Right-handed alpha
Helix 66	AH3	C	519	530	Right-handed alpha
Helix 67	AH4	C	537	546	Right-handed alpha
Helix 68	AH5	C	549	558	Right-handed alpha
Helix 69	AH6	C	563	572	Right-handed alpha
Helix 70	AH7	C	574	594	Right-handed alpha
Helix 71	AH8	D	47	62	Right-handed alpha
Helix 72	AH9	D	65	69	Right-handed 310
Helix 73	AI1	D	72	74	Right-handed 310
Helix 74	AI2	D	75	90	Right-handed alpha
Helix 75	AI3	D	107	121	Right-handed alpha
Helix 76	AI4	D	140	158	Right-handed alpha
Helix 77	AI5	D	176	189	Right-handed alpha
Helix 78	AI6	D	219	223	Right-handed 310
Helix 79	AI7	D	228	240	Right-handed alpha
Helix 80	AI8	D	255	259	Right-handed 310
Helix 81	AI9	D	261	268	Right-handed alpha
Helix 82	AJ1	D	280	293	Right-handed alpha
Helix 83	AJ2	D	301	315	Right-handed alpha
Helix 84	AJ3	D	318	331	Right-handed alpha
Helix 85	AJ4	D	333	347	Right-handed alpha
Helix 86	AJ5	D	350	361	Right-handed alpha
Helix 87	AJ6	D	361	372	Right-handed alpha
Helix 88	AJ7	D	375	381	Right-handed alpha
Helix 89	AJ8	D	384	401	Right-handed alpha
Helix 90	AJ9	D	407	424	Right-handed alpha
Helix 91	AK1	D	452	466	Right-handed alpha
Helix 92	AK2	D	480	489	Right-handed alpha
Helix 93	AK3	D	492	496	Right-handed 310
Helix 94	AK4	D	498	502	Right-handed 310
Helix 95	AK5	D	509	517	Right-handed alpha
Helix 96	AK6	D	523	528	Right-handed 310
Helix 97	AK7	E	11	22	Right-handed alpha
Helix 98	AK8	E	25	29	Right-handed 310
Helix 99	AK9	E	42	54	Right-handed alpha
Helix 100	AL1	E	63	67	Right-handed 310
Helix 101	AL2	E	69	89	Right-handed alpha
Helix 102	AL3	E	98	102	Right-handed 310
Helix 103	AL4	E	104	117	Right-handed alpha
Helix 104	AL5	E	118	120	Right-handed 310
Helix 105	AL6	E	134	138	Right-handed 310
Helix 106	AL7	E	144	151	Right-handed alpha
Helix 107	AL8	E	152	155	Right-handed 310
Helix 108	AL9	E	172	178	Right-handed alpha
Helix 109	AM1	E	179	183	Right-handed 310
Helix 110	AM2	E	193	211	Right-handed alpha
Helix 111	AM3	E	212	222	Right-handed alpha
Helix 112	AM4	E	230	252	Right-handed alpha
Helix 113	AM5	E	254	271	Right-handed alpha
Helix 114	AM6	E	280	288	Right-handed alpha
Helix 115	AM7	E	289	293	Right-handed 310
Helix 116	AM8	E	325	341	Right-handed alpha
Helix 117	AM9	E	342	345	Right-handed 310
Helix 118	AN1	E	346	351	Right-handed alpha
Helix 119	AN2	E	372	376	Right-handed 310
Helix 120	AN3	E	382	394	Right-handed alpha
Helix 121	AN4	E	417	430	Right-handed alpha
Helix 122	AN5	E	455	466	Right-handed alpha
Helix 123	AN6	E	470	474	Right-handed 310
Helix 124	AN7	F	281	291	Right-handed alpha
Helix 125	AN8	F	295	309	Right-handed alpha
Helix 126	AN9	F	315	332	Right-handed alpha
Helix 127	AO1	F	332	339	Right-handed alpha
Helix 128	AO2	F	340	354	Right-handed alpha
Helix 129	AO3	F	358	374	Right-handed alpha
Helix 130	AO4	F	376	387	Right-handed alpha
Helix 131	AO5	F	393	403	Right-handed alpha
Helix 132	AO6	F	414	427	Right-handed alpha
Helix 133	AO7	I	54	62	Right-handed alpha
Helix 134	AO8	I	81	99	Right-handed alpha
Helix 135	AO9	I	113	126	Right-handed alpha
Helix 136	AP1	I	177	179	Right-handed 310
Helix 137	AP2	I	180	188	Right-handed alpha
Helix 138	AP3	I	201	209	Right-handed alpha
Helix 139	AP4	I	225	229	Right-handed 310
Helix 140	AP5	I	239	249	Right-handed alpha
Helix 141	AP6	I	292	304	Right-handed alpha
Helix 142	AP7	I	305	307	Right-handed 310
Helix 143	AP8	I	313	326	Right-handed alpha
Helix 144	AP9	I	330	349	Right-handed alpha
Helix 145	AQ1	I	387	397	Right-handed alpha
Helix 146	AQ2	I	402	409	Right-handed alpha
Helix 147	AQ3	I	411	429	Right-handed alpha
Helix 148	AQ4	I	432	446	Right-handed alpha
Helix 149	AQ5	I	454	469	Right-handed alpha
Helix 150	AQ6	I	494	504	Right-handed alpha

There are 14 sheets in PDB entry 7TJH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	411	412	first strand
Strand 2	D	208	209	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	508	514	first strand
Strand 2	A	560	566	parallel
Strand 3	A	593	599	parallel
Strand 4	A	473	479	parallel
Strand 5	A	622	624	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	657	659	first strand
Strand 2	A	646	650	anti-parallel
Strand 3	A	678	684	anti-parallel
Strand 4	A	770	773	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	819	821	first strand
Strand 2	A	891	894	anti-parallel
Strand 3	A	879	881	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	479	first strand
Strand 2	B	313	317	parallel
Strand 3	B	450	455	parallel
Strand 4	B	420	425	parallel
Strand 5	B	360	364	parallel
Strand 6	C	22	25	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	124	131	first strand
Strand 2	C	198	205	parallel
Strand 3	C	232	240	parallel
Strand 4	C	103	108	parallel
Strand 5	C	263	267	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	293	294	first strand
Strand 2	C	467	468	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	536	first strand
Strand 2	C	607	610	anti-parallel
Strand 3	C	597	599	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	133	first strand
Strand 2	D	211	217	parallel
Strand 3	D	245	251	parallel
Strand 4	D	96	101	parallel
Strand 5	D	272	274	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	469	471	first strand
Strand 2	D	504	506	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	62	first strand
Strand 2	E	126	132	parallel
Strand 3	E	162	170	parallel
Strand 4	E	32	37	parallel
Strand 5	E	186	189	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	433	435	first strand
Strand 2	E	450	452	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	152	154	first strand
Strand 2	I	164	171	anti-parallel
Strand 3	I	217	223	parallel
Strand 4	I	256	261	parallel
Strand 5	I	102	107	parallel
Strand 6	I	284	287	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	471	477	first strand
Strand 2	I	485	491	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TJH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJH