Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TJU entry

There are 7 chains in PDB entry 7TJU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 26	THR 509
B	ALA 25	THR 509
C	ASN 28	THR 509
D	PRO 8	ALA 475
E	PRO 8	ALA 475
F	PRO 8	ALA 475
G	ALA 1	SER 276

There are146 helices in PDB entry 7TJU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	80	84	Right-handed 310
Helix 2	AA2	A	102	106	Right-handed 310
Helix 3	AA3	A	152	159	Right-handed alpha
Helix 4	AA4	A	176	188	Right-handed alpha
Helix 5	AA5	A	188	193	Right-handed alpha
Helix 6	AA6	A	211	225	Right-handed alpha
Helix 7	AA7	A	227	229	Right-handed 310
Helix 8	AA8	A	241	262	Right-handed alpha
Helix 9	AA9	A	272	287	Right-handed alpha
Helix 10	AB1	A	292	296	Right-handed 310
Helix 11	AB2	A	299	309	Right-handed alpha
Helix 12	AB3	A	315	319	Right-handed 310
Helix 13	AB4	A	338	348	Right-handed alpha
Helix 14	AB5	A	355	360	Right-handed alpha
Helix 15	AB6	A	376	380	Right-handed 310
Helix 16	AB7	A	382	407	Right-handed alpha
Helix 17	AB8	A	413	431	Right-handed alpha
Helix 18	AB9	A	439	452	Right-handed alpha
Helix 19	AC1	A	453	458	Right-handed 310
Helix 20	AC2	A	459	461	Right-handed 310
Helix 21	AC3	A	462	478	Right-handed alpha
Helix 22	AC4	A	478	489	Right-handed alpha
Helix 23	AC5	A	492	509	Right-handed alpha
Helix 24	AC6	B	80	84	Right-handed 310
Helix 25	AC7	B	102	106	Right-handed 310
Helix 26	AC8	B	152	159	Right-handed alpha
Helix 27	AC9	B	176	188	Right-handed alpha
Helix 28	AD1	B	188	193	Right-handed alpha
Helix 29	AD2	B	211	225	Right-handed alpha
Helix 30	AD3	B	227	229	Right-handed 310
Helix 31	AD4	B	241	262	Right-handed alpha
Helix 32	AD5	B	272	287	Right-handed alpha
Helix 33	AD6	B	292	296	Right-handed 310
Helix 34	AD7	B	299	309	Right-handed alpha
Helix 35	AD8	B	315	319	Right-handed 310
Helix 36	AD9	B	338	348	Right-handed alpha
Helix 37	AE1	B	355	361	Right-handed alpha
Helix 38	AE2	B	376	381	Right-handed 310
Helix 39	AE3	B	382	389	Right-handed alpha
Helix 40	AE4	B	391	406	Right-handed alpha
Helix 41	AE5	B	416	431	Right-handed alpha
Helix 42	AE6	B	439	453	Right-handed alpha
Helix 43	AE7	B	454	458	Right-handed 310
Helix 44	AE8	B	459	461	Right-handed 310
Helix 45	AE9	B	462	478	Right-handed alpha
Helix 46	AF1	B	478	489	Right-handed alpha
Helix 47	AF2	B	492	503	Right-handed alpha
Helix 48	AF3	B	503	508	Right-handed alpha
Helix 49	AF4	C	80	84	Right-handed 310
Helix 50	AF5	C	102	106	Right-handed 310
Helix 51	AF6	C	152	159	Right-handed alpha
Helix 52	AF7	C	176	188	Right-handed alpha
Helix 53	AF8	C	188	193	Right-handed alpha
Helix 54	AF9	C	211	225	Right-handed alpha
Helix 55	AG1	C	226	229	Right-handed 310
Helix 56	AG2	C	241	262	Right-handed alpha
Helix 57	AG3	C	272	287	Right-handed alpha
Helix 58	AG4	C	292	296	Right-handed 310
Helix 59	AG5	C	299	309	Right-handed alpha
Helix 60	AG6	C	338	348	Right-handed alpha
Helix 61	AG7	C	355	361	Right-handed alpha
Helix 62	AG8	C	376	381	Right-handed 310
Helix 63	AG9	C	382	389	Right-handed alpha
Helix 64	AH1	C	391	408	Right-handed alpha
Helix 65	AH2	C	413	430	Right-handed alpha
Helix 66	AH3	C	439	452	Right-handed alpha
Helix 67	AH4	C	453	458	Right-handed 310
Helix 68	AH5	C	459	461	Right-handed 310
Helix 69	AH6	C	462	478	Right-handed alpha
Helix 70	AH7	C	478	489	Right-handed alpha
Helix 71	AH8	C	492	508	Right-handed alpha
Helix 72	AH9	D	88	92	Right-handed 310
Helix 73	AI1	D	138	145	Right-handed alpha
Helix 74	AI2	D	162	178	Right-handed alpha
Helix 75	AI3	D	190	205	Right-handed alpha
Helix 76	AI4	D	225	246	Right-handed alpha
Helix 77	AI5	D	257	273	Right-handed alpha
Helix 78	AI6	D	277	281	Right-handed 310
Helix 79	AI7	D	282	283	Right-handed 310
Helix 80	AI8	D	284	294	Right-handed alpha
Helix 81	AI9	D	295	297	Right-handed 310
Helix 82	AJ1	D	312	316	Right-handed 310
Helix 83	AJ2	D	319	327	Right-handed alpha
Helix 84	AJ3	D	336	342	Right-handed alpha
Helix 85	AJ4	D	359	364	Right-handed alpha
Helix 86	AJ5	D	364	392	Right-handed alpha
Helix 87	AJ6	D	393	396	Right-handed 310
Helix 88	AJ7	D	397	414	Right-handed alpha
Helix 89	AJ8	D	418	420	Right-handed 310
Helix 90	AJ9	D	421	426	Right-handed alpha
Helix 91	AK1	D	433	446	Right-handed alpha
Helix 92	AK2	D	453	458	Right-handed 310
Helix 93	AK3	D	462	475	Right-handed alpha
Helix 94	AK4	E	88	92	Right-handed 310
Helix 95	AK5	E	123	127	Right-handed 310
Helix 96	AK6	E	138	145	Right-handed alpha
Helix 97	AK7	E	162	179	Right-handed alpha
Helix 98	AK8	E	190	205	Right-handed alpha
Helix 99	AK9	E	225	248	Right-handed alpha
Helix 100	AL1	E	257	272	Right-handed alpha
Helix 101	AL2	E	277	281	Right-handed 310
Helix 102	AL3	E	284	294	Right-handed alpha
Helix 103	AL4	E	295	297	Right-handed 310
Helix 104	AL5	E	312	316	Right-handed 310
Helix 105	AL6	E	319	327	Right-handed alpha
Helix 106	AL7	E	336	341	Right-handed alpha
Helix 107	AL8	E	359	364	Right-handed alpha
Helix 108	AL9	E	364	391	Right-handed alpha
Helix 109	AM1	E	392	396	Right-handed 310
Helix 110	AM2	E	397	414	Right-handed alpha
Helix 111	AM3	E	419	424	Right-handed 310
Helix 112	AM4	E	433	446	Right-handed alpha
Helix 113	AM5	E	453	458	Right-handed 310
Helix 114	AM6	E	462	475	Right-handed alpha
Helix 115	AM7	F	88	92	Right-handed 310
Helix 116	AM8	F	138	145	Right-handed alpha
Helix 117	AM9	F	162	179	Right-handed alpha
Helix 118	AN1	F	190	204	Right-handed alpha
Helix 119	AN2	F	225	247	Right-handed alpha
Helix 120	AN3	F	258	270	Right-handed alpha
Helix 121	AN4	F	271	273	Right-handed 310
Helix 122	AN5	F	284	294	Right-handed alpha
Helix 123	AN6	F	313	316	Right-handed 310
Helix 124	AN7	F	319	326	Right-handed alpha
Helix 125	AN8	F	336	341	Right-handed alpha
Helix 126	AN9	F	359	364	Right-handed alpha
Helix 127	AO1	F	364	392	Right-handed alpha
Helix 128	AO2	F	393	396	Right-handed 310
Helix 129	AO3	F	397	414	Right-handed alpha
Helix 130	AO4	F	418	420	Right-handed 310
Helix 131	AO5	F	421	426	Right-handed alpha
Helix 132	AO6	F	433	446	Right-handed alpha
Helix 133	AO7	F	453	458	Right-handed 310
Helix 134	AO8	F	462	475	Right-handed alpha
Helix 135	AO9	G	2	45	Right-handed alpha
Helix 136	AP1	G	45	56	Right-handed alpha
Helix 137	AP2	G	86	100	Right-handed alpha
Helix 138	AP3	G	111	118	Right-handed alpha
Helix 139	AP4	G	119	121	Right-handed 310
Helix 140	AP5	G	122	124	Right-handed 310
Helix 141	AP6	G	132	136	Right-handed 310
Helix 142	AP7	G	139	155	Right-handed alpha
Helix 143	AP8	G	156	159	Right-handed 310
Helix 144	AP9	G	185	190	Right-handed alpha
Helix 145	AQ1	G	191	197	Right-handed 310
Helix 146	AQ2	G	205	276	Right-handed alpha

There are 20 sheets in PDB entry 7TJU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	68	first strand
Strand 2	A	53	57	anti-parallel
Strand 3	A	89	96	anti-parallel
Strand 4	A	30	37	anti-parallel
Strand 5	A	40	45	anti-parallel
Strand 6	A	72	77	anti-parallel
Strand 7	A	62	68	anti-parallel
Strand 8	E	10	17	anti-parallel
Strand 9	E	75	78	anti-parallel
Strand 10	E	36	39	anti-parallel
Strand 11	E	46	55	anti-parallel
Strand 12	E	58	63	anti-parallel
Strand 13	E	20	24	anti-parallel
Strand 14	E	10	17	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	101	first strand
Strand 2	A	127	130	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	231	236	parallel
Strand 3	A	202	208	parallel
Strand 4	A	265	271	parallel
Strand 5	A	322	325	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	328	331	first strand
Strand 2	A	168	172	parallel
Strand 3	A	350	354	parallel
Strand 4	A	373	374	anti-parallel

Back to list of sheets
Back to top of page

There are 14 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	69	first strand
Strand 2	B	53	57	anti-parallel
Strand 3	B	89	96	anti-parallel
Strand 4	B	30	37	anti-parallel
Strand 5	B	40	45	anti-parallel
Strand 6	B	72	77	anti-parallel
Strand 7	B	62	69	anti-parallel
Strand 8	F	10	17	anti-parallel
Strand 9	F	75	78	anti-parallel
Strand 10	F	36	41	anti-parallel
Strand 11	F	44	55	anti-parallel
Strand 12	F	58	63	anti-parallel
Strand 13	F	20	25	anti-parallel
Strand 14	F	10	17	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	101	first strand
Strand 2	B	127	130	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	231	236	parallel
Strand 3	B	202	208	parallel
Strand 4	B	265	271	parallel
Strand 5	B	322	331	parallel
Strand 6	B	168	172	parallel
Strand 7	B	350	354	parallel
Strand 8	B	373	374	anti-parallel

Back to list of sheets
Back to top of page

There are 14 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	68	first strand
Strand 2	C	53	57	anti-parallel
Strand 3	C	89	96	anti-parallel
Strand 4	C	30	37	anti-parallel
Strand 5	C	40	45	anti-parallel
Strand 6	C	73	77	anti-parallel
Strand 7	C	62	68	anti-parallel
Strand 8	D	10	17	anti-parallel
Strand 9	D	75	82	anti-parallel
Strand 10	D	35	41	anti-parallel
Strand 11	D	44	55	anti-parallel
Strand 12	D	58	63	anti-parallel
Strand 13	D	20	25	anti-parallel
Strand 14	D	10	17	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	101	first strand
Strand 2	C	127	130	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	110	first strand
Strand 2	C	231	236	parallel
Strand 3	C	202	208	parallel
Strand 4	C	265	271	parallel
Strand 5	C	322	331	parallel
Strand 6	C	168	172	parallel
Strand 7	C	350	354	parallel
Strand 8	C	373	374	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	86	first strand
Strand 2	D	114	116	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	95	96	first strand
Strand 2	D	215	219	parallel
Strand 3	D	182	186	parallel
Strand 4	D	250	256	parallel
Strand 5	D	303	310	parallel
Strand 6	D	152	156	parallel
Strand 7	D	331	334	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	134	first strand
Strand 2	D	147	148	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	86	first strand
Strand 2	E	114	116	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	96	first strand
Strand 2	E	215	220	parallel
Strand 3	E	182	187	parallel
Strand 4	E	250	256	parallel
Strand 5	E	303	309	parallel
Strand 6	E	152	156	parallel
Strand 7	E	331	334	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	134	first strand
Strand 2	E	147	148	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	84	86	first strand
Strand 2	F	114	116	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	95	96	first strand
Strand 2	F	215	218	parallel
Strand 3	F	182	186	parallel
Strand 4	F	251	256	parallel
Strand 5	F	304	311	parallel
Strand 6	F	152	157	parallel
Strand 7	F	331	334	parallel
Strand 8	F	354	355	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	134	first strand
Strand 2	F	147	148	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	126	130	first strand
Strand 2	G	106	110	parallel
Strand 3	G	73	77	parallel
Strand 4	G	162	168	parallel
Strand 5	G	176	182	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TJU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJU