Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TJX entry

There are 7 chains in PDB entry 7TJX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 29	THR 509
B	ALA 25	ALA 508
C	ASN 26	THR 509
D	ILE 9	ALA 475
E	ILE 9	ALA 474
F	ILE 9	ALA 475
G	THR 2	SER 276

There are136 helices in PDB entry 7TJX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	80	84	Right-handed 310
Helix 2	AA2	A	102	106	Right-handed 310
Helix 3	AA3	A	111	115	Right-handed 310
Helix 4	AA4	A	152	159	Right-handed alpha
Helix 5	AA5	A	176	188	Right-handed alpha
Helix 6	AA6	A	188	193	Right-handed alpha
Helix 7	AA7	A	196	200	Right-handed 310
Helix 8	AA8	A	211	225	Right-handed alpha
Helix 9	AA9	A	226	229	Right-handed 310
Helix 10	AB1	A	241	262	Right-handed alpha
Helix 11	AB2	A	272	287	Right-handed alpha
Helix 12	AB3	A	292	296	Right-handed 310
Helix 13	AB4	A	297	298	Right-handed 310
Helix 14	AB5	A	299	309	Right-handed alpha
Helix 15	AB6	A	338	348	Right-handed alpha
Helix 16	AB7	A	355	362	Right-handed alpha
Helix 17	AB8	A	376	381	Right-handed 310
Helix 18	AB9	A	382	402	Right-handed alpha
Helix 19	AC1	A	414	431	Right-handed alpha
Helix 20	AC2	A	439	453	Right-handed alpha
Helix 21	AC3	A	454	458	Right-handed 310
Helix 22	AC4	A	459	478	Right-handed alpha
Helix 23	AC5	A	478	489	Right-handed alpha
Helix 24	AC6	A	492	508	Right-handed alpha
Helix 25	AC7	B	80	84	Right-handed 310
Helix 26	AC8	B	102	106	Right-handed 310
Helix 27	AC9	B	154	159	Right-handed alpha
Helix 28	AD1	B	176	187	Right-handed alpha
Helix 29	AD2	B	188	193	Right-handed alpha
Helix 30	AD3	B	196	200	Right-handed 310
Helix 31	AD4	B	211	225	Right-handed alpha
Helix 32	AD5	B	227	229	Right-handed 310
Helix 33	AD6	B	241	262	Right-handed alpha
Helix 34	AD7	B	273	287	Right-handed alpha
Helix 35	AD8	B	292	296	Right-handed 310
Helix 36	AD9	B	297	298	Right-handed 310
Helix 37	AE1	B	299	309	Right-handed alpha
Helix 38	AE2	B	332	335	Right-handed 310
Helix 39	AE3	B	338	346	Right-handed alpha
Helix 40	AE4	B	355	361	Right-handed alpha
Helix 41	AE5	B	384	389	Right-handed alpha
Helix 42	AE6	B	391	406	Right-handed alpha
Helix 43	AE7	B	413	431	Right-handed alpha
Helix 44	AE8	B	439	452	Right-handed alpha
Helix 45	AE9	B	462	476	Right-handed alpha
Helix 46	AF1	B	480	489	Right-handed alpha
Helix 47	AF2	B	492	508	Right-handed alpha
Helix 48	AF3	C	80	84	Right-handed 310
Helix 49	AF4	C	102	106	Right-handed 310
Helix 50	AF5	C	152	159	Right-handed alpha
Helix 51	AF6	C	176	187	Right-handed alpha
Helix 52	AF7	C	188	193	Right-handed alpha
Helix 53	AF8	C	211	225	Right-handed alpha
Helix 54	AF9	C	227	229	Right-handed 310
Helix 55	AG1	C	241	262	Right-handed alpha
Helix 56	AG2	C	272	287	Right-handed alpha
Helix 57	AG3	C	292	296	Right-handed 310
Helix 58	AG4	C	299	309	Right-handed alpha
Helix 59	AG5	C	315	319	Right-handed 310
Helix 60	AG6	C	338	348	Right-handed alpha
Helix 61	AG7	C	355	361	Right-handed alpha
Helix 62	AG8	C	376	380	Right-handed 310
Helix 63	AG9	C	382	407	Right-handed alpha
Helix 64	AH1	C	413	430	Right-handed alpha
Helix 65	AH2	C	439	453	Right-handed alpha
Helix 66	AH3	C	454	458	Right-handed 310
Helix 67	AH4	C	459	461	Right-handed 310
Helix 68	AH5	C	462	478	Right-handed alpha
Helix 69	AH6	C	478	489	Right-handed alpha
Helix 70	AH7	C	492	509	Right-handed alpha
Helix 71	AH8	D	88	92	Right-handed 310
Helix 72	AH9	D	138	145	Right-handed alpha
Helix 73	AI1	D	162	178	Right-handed alpha
Helix 74	AI2	D	190	205	Right-handed alpha
Helix 75	AI3	D	225	246	Right-handed alpha
Helix 76	AI4	D	257	273	Right-handed alpha
Helix 77	AI5	D	284	294	Right-handed alpha
Helix 78	AI6	D	313	316	Right-handed 310
Helix 79	AI7	D	319	326	Right-handed alpha
Helix 80	AI8	D	327	329	Right-handed 310
Helix 81	AI9	D	336	342	Right-handed alpha
Helix 82	AJ1	D	355	358	Right-handed 310
Helix 83	AJ2	D	359	364	Right-handed alpha
Helix 84	AJ3	D	364	385	Right-handed alpha
Helix 85	AJ4	D	386	388	Right-handed 310
Helix 86	AJ5	D	404	414	Right-handed alpha
Helix 87	AJ6	D	421	426	Right-handed alpha
Helix 88	AJ7	D	433	446	Right-handed alpha
Helix 89	AJ8	D	462	475	Right-handed alpha
Helix 90	AJ9	E	88	92	Right-handed 310
Helix 91	AK1	E	138	145	Right-handed alpha
Helix 92	AK2	E	162	178	Right-handed alpha
Helix 93	AK3	E	190	204	Right-handed alpha
Helix 94	AK4	E	225	246	Right-handed alpha
Helix 95	AK5	E	258	273	Right-handed alpha
Helix 96	AK6	E	277	281	Right-handed 310
Helix 97	AK7	E	284	294	Right-handed alpha
Helix 98	AK8	E	312	316	Right-handed 310
Helix 99	AK9	E	319	327	Right-handed alpha
Helix 100	AL1	E	336	341	Right-handed alpha
Helix 101	AL2	E	359	364	Right-handed alpha
Helix 102	AL3	E	364	385	Right-handed alpha
Helix 103	AL4	E	397	414	Right-handed alpha
Helix 104	AL5	E	421	426	Right-handed alpha
Helix 105	AL6	E	433	446	Right-handed alpha
Helix 106	AL7	E	461	474	Right-handed alpha
Helix 107	AL8	F	88	92	Right-handed 310
Helix 108	AL9	F	123	127	Right-handed 310
Helix 109	AM1	F	138	145	Right-handed alpha
Helix 110	AM2	F	162	175	Right-handed alpha
Helix 111	AM3	F	176	178	Right-handed 310
Helix 112	AM4	F	190	204	Right-handed alpha
Helix 113	AM5	F	225	246	Right-handed alpha
Helix 114	AM6	F	258	273	Right-handed alpha
Helix 115	AM7	F	277	281	Right-handed 310
Helix 116	AM8	F	282	283	Right-handed 310
Helix 117	AM9	F	284	294	Right-handed alpha
Helix 118	AN1	F	313	316	Right-handed 310
Helix 119	AN2	F	319	326	Right-handed alpha
Helix 120	AN3	F	327	329	Right-handed 310
Helix 121	AN4	F	336	341	Right-handed alpha
Helix 122	AN5	F	359	364	Right-handed alpha
Helix 123	AN6	F	364	392	Right-handed alpha
Helix 124	AN7	F	393	396	Right-handed 310
Helix 125	AN8	F	397	414	Right-handed alpha
Helix 126	AN9	F	421	426	Right-handed alpha
Helix 127	AO1	F	433	446	Right-handed alpha
Helix 128	AO2	F	453	458	Right-handed 310
Helix 129	AO3	F	462	475	Right-handed alpha
Helix 130	AO4	G	3	54	Right-handed alpha
Helix 131	AO5	G	86	101	Right-handed alpha
Helix 132	AO6	G	111	120	Right-handed alpha
Helix 133	AO7	G	139	153	Right-handed alpha
Helix 134	AO8	G	155	159	Right-handed 310
Helix 135	AO9	G	184	190	Right-handed alpha
Helix 136	AP1	G	204	276	Right-handed alpha

There are 23 sheets in PDB entry 7TJX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	37	first strand
Strand 2	A	40	45	anti-parallel
Strand 3	A	72	77	anti-parallel
Strand 4	A	62	69	anti-parallel
Strand 5	A	53	57	anti-parallel
Strand 6	A	89	96	anti-parallel
Strand 7	A	30	37	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	101	first strand
Strand 2	A	127	130	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	231	236	parallel
Strand 3	A	202	208	parallel
Strand 4	A	265	271	parallel
Strand 5	A	322	331	parallel
Strand 6	A	312	313	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	231	236	parallel
Strand 3	A	202	208	parallel
Strand 4	A	265	271	parallel
Strand 5	A	322	331	parallel
Strand 6	A	168	172	parallel
Strand 7	A	351	354	parallel

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There are 13 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	78	first strand
Strand 2	F	36	41	anti-parallel
Strand 3	F	44	55	anti-parallel
Strand 4	F	58	63	anti-parallel
Strand 5	F	20	24	anti-parallel
Strand 6	F	12	17	anti-parallel
Strand 7	B	62	69	anti-parallel
Strand 8	B	72	77	anti-parallel
Strand 9	B	40	45	anti-parallel
Strand 10	B	30	37	anti-parallel
Strand 11	B	89	96	anti-parallel
Strand 12	B	53	57	anti-parallel
Strand 13	B	62	69	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	101	first strand
Strand 2	B	127	130	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	231	236	parallel
Strand 3	B	202	208	parallel
Strand 4	B	266	271	parallel
Strand 5	B	322	330	parallel
Strand 6	B	312	313	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	231	236	parallel
Strand 3	B	202	208	parallel
Strand 4	B	266	271	parallel
Strand 5	B	322	330	parallel
Strand 6	B	168	171	parallel
Strand 7	B	350	354	parallel
Strand 8	B	373	374	anti-parallel

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There are 14 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	68	first strand
Strand 2	C	54	57	anti-parallel
Strand 3	C	89	92	anti-parallel
Strand 4	C	30	37	anti-parallel
Strand 5	C	40	45	anti-parallel
Strand 6	C	73	77	anti-parallel
Strand 7	C	62	68	anti-parallel
Strand 8	D	10	17	anti-parallel
Strand 9	D	75	82	anti-parallel
Strand 10	D	35	41	anti-parallel
Strand 11	D	44	53	anti-parallel
Strand 12	D	58	63	anti-parallel
Strand 13	D	20	24	anti-parallel
Strand 14	D	10	17	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	101	first strand
Strand 2	C	127	130	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	110	first strand
Strand 2	C	231	236	parallel
Strand 3	C	202	208	parallel
Strand 4	C	265	271	parallel
Strand 5	C	322	330	parallel
Strand 6	C	312	313	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	110	first strand
Strand 2	C	231	236	parallel
Strand 3	C	202	208	parallel
Strand 4	C	265	271	parallel
Strand 5	C	322	330	parallel
Strand 6	C	167	171	parallel
Strand 7	C	350	353	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	86	first strand
Strand 2	D	114	116	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	95	96	first strand
Strand 2	D	215	221	parallel
Strand 3	D	182	189	parallel
Strand 4	D	250	255	parallel
Strand 5	D	303	311	parallel
Strand 6	D	152	157	parallel
Strand 7	D	331	334	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	134	first strand
Strand 2	D	147	148	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	17	first strand
Strand 2	E	20	24	anti-parallel
Strand 3	E	58	63	anti-parallel
Strand 4	E	46	55	anti-parallel
Strand 5	E	36	39	anti-parallel
Strand 6	E	75	78	anti-parallel
Strand 7	E	10	17	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	86	first strand
Strand 2	E	114	116	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	96	first strand
Strand 2	E	215	221	parallel
Strand 3	E	182	189	parallel
Strand 4	E	250	256	parallel
Strand 5	E	302	309	parallel
Strand 6	E	298	299	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	96	first strand
Strand 2	E	215	221	parallel
Strand 3	E	182	189	parallel
Strand 4	E	250	256	parallel
Strand 5	E	302	309	parallel
Strand 6	E	152	157	parallel
Strand 7	E	331	335	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	84	86	first strand
Strand 2	F	114	116	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	95	96	first strand
Strand 2	F	215	220	parallel
Strand 3	F	182	187	parallel
Strand 4	F	251	256	parallel
Strand 5	F	304	311	parallel
Strand 6	F	152	157	parallel
Strand 7	F	331	335	parallel
Strand 8	F	348	355	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	134	first strand
Strand 2	F	147	148	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	105	109	first strand
Strand 2	G	72	76	parallel
Strand 3	G	162	169	parallel
Strand 4	G	175	179	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TJX

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TJX