Analysis of interatomic Contacts of Structural Units in PDB entry:
7TKC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TKC entry

There are 27 chains in PDB entry 7TKC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
0
MET 1GLY 75
1
MET 1GLY 75
2
MET 1GLY 75
3
GLN 2GLY 75
4
MET 1GLY 75
5
MET 1GLY 75
6
GLN 2GLY 75
7
MET 1LEU 73
8
MET 1GLY 75
9
GLN 2GLY 75
A
GLU 9THR 509
B
THR 3THR 509
C
SER 12THR 509
D
SER 6ALA 475
E
PRO 8ALA 475
F
THR 7ALA 475
G
ALA 1SER 276
H
LYS 11VAL 136
I
ILE 8LYS 61
O
PRO 7ASP 193
T
LEU 26HIS 249
U
ASN 53LYS 207
V
ALA 3MET 173
W
VAL 1HIS 85
X
ASN 1HIS 62
Y
MET 1THR 37
Z
MET 1LEU 48
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are198 helices in PDB entry 7TKC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
0
1 18Right-handed alpha
Helix 2
AA2
0
18 40Right-handed alpha
Helix 3
AA3
0
43 74Right-handed alpha
Helix 4
AA4
1
2 17Right-handed alpha
Helix 5
AA5
1
18 40Right-handed alpha
Helix 6
AA6
1
43 74Right-handed alpha
Helix 7
AA7
2
2 16Right-handed alpha
Helix 8
AA8
2
18 40Right-handed alpha
Helix 9
AA9
2
43 74Right-handed alpha
Helix 10
AB1
3
3 17Right-handed alpha
Helix 11
AB2
3
18 40Right-handed alpha
Helix 12
AB3
3
43 74Right-handed alpha
Helix 13
AB4
4
2 16Right-handed alpha
Helix 14
AB5
4
18 40Right-handed alpha
Helix 15
AB6
4
43 75Right-handed alpha
Helix 16
AB7
5
2 17Right-handed alpha
Helix 17
AB8
5
18 40Right-handed alpha
Helix 18
AB9
5
43 75Right-handed alpha
Helix 19
AC1
6
3 17Right-handed alpha
Helix 20
AC2
6
18 40Right-handed alpha
Helix 21
AC3
6
43 75Right-handed alpha
Helix 22
AC4
7
2 16Right-handed alpha
Helix 23
AC5
7
18 40Right-handed alpha
Helix 24
AC6
7
43 73Right-handed alpha
Helix 25
AC7
8
2 16Right-handed alpha
Helix 26
AC8
8
19 40Right-handed alpha
Helix 27
AC9
8
43 75Right-handed alpha
Helix 28
AD1
9
3 18Right-handed alpha
Helix 29
AD2
9
18 40Right-handed alpha
Helix 30
AD3
9
43 75Right-handed alpha
Helix 31
AD4
A
10 20Right-handed alpha
Helix 32
AD5
A
102 106Right-handed 310
Helix 33
AD6
A
152 159Right-handed alpha
Helix 34
AD7
A
176 194Right-handed alpha
Helix 35
AD8
A
211 225Right-handed alpha
Helix 36
AD9
A
241 262Right-handed alpha
Helix 37
AE1
A
272 287Right-handed alpha
Helix 38
AE2
A
292 296Right-handed 310
Helix 39
AE3
A
297 298Right-handed 310
Helix 40
AE4
A
299 309Right-handed alpha
Helix 41
AE5
A
338 348Right-handed alpha
Helix 42
AE6
A
355 361Right-handed alpha
Helix 43
AE7
A
376 380Right-handed 310
Helix 44
AE8
A
382 388Right-handed alpha
Helix 45
AE9
A
389 402Right-handed alpha
Helix 46
AF1
A
413 430Right-handed alpha
Helix 47
AF2
A
439 452Right-handed alpha
Helix 48
AF3
A
460 478Right-handed alpha
Helix 49
AF4
A
478 489Right-handed alpha
Helix 50
AF5
A
492 509Right-handed alpha
Helix 51
AF6
B
10 19Right-handed alpha
Helix 52
AF7
B
25 28Right-handed 310
Helix 53
AF8
B
153 157Right-handed 310
Helix 54
AF9
B
176 188Right-handed alpha
Helix 55
AG1
B
188 193Right-handed alpha
Helix 56
AG2
B
211 225Right-handed alpha
Helix 57
AG3
B
227 229Right-handed 310
Helix 58
AG4
B
241 247Right-handed alpha
Helix 59
AG5
B
247 261Right-handed alpha
Helix 60
AG6
B
272 287Right-handed alpha
Helix 61
AG7
B
292 296Right-handed 310
Helix 62
AG8
B
299 309Right-handed alpha
Helix 63
AG9
B
332 335Right-handed 310
Helix 64
AH1
B
338 348Right-handed alpha
Helix 65
AH2
B
355 361Right-handed alpha
Helix 66
AH3
B
376 380Right-handed 310
Helix 67
AH4
B
383 388Right-handed alpha
Helix 68
AH5
B
391 407Right-handed alpha
Helix 69
AH6
B
413 431Right-handed alpha
Helix 70
AH7
B
439 452Right-handed alpha
Helix 71
AH8
B
459 461Right-handed 310
Helix 72
AH9
B
462 488Right-handed alpha
Helix 73
AI1
B
492 509Right-handed alpha
Helix 74
AI2
C
13 21Right-handed alpha
Helix 75
AI3
C
102 106Right-handed 310
Helix 76
AI4
C
152 159Right-handed alpha
Helix 77
AI5
C
176 194Right-handed alpha
Helix 78
AI6
C
211 225Right-handed alpha
Helix 79
AI7
C
241 263Right-handed alpha
Helix 80
AI8
C
272 286Right-handed alpha
Helix 81
AI9
C
292 296Right-handed 310
Helix 82
AJ1
C
299 309Right-handed alpha
Helix 83
AJ2
C
338 348Right-handed alpha
Helix 84
AJ3
C
355 362Right-handed alpha
Helix 85
AJ4
C
382 389Right-handed alpha
Helix 86
AJ5
C
391 408Right-handed alpha
Helix 87
AJ6
C
413 431Right-handed alpha
Helix 88
AJ7
C
439 442Right-handed 310
Helix 89
AJ8
C
443 452Right-handed alpha
Helix 90
AJ9
C
453 458Right-handed alpha
Helix 91
AK1
C
459 461Right-handed 310
Helix 92
AK2
C
462 477Right-handed alpha
Helix 93
AK3
C
478 489Right-handed alpha
Helix 94
AK4
C
492 506Right-handed alpha
Helix 95
AK5
D
138 145Right-handed alpha
Helix 96
AK6
D
162 178Right-handed alpha
Helix 97
AK7
D
190 205Right-handed alpha
Helix 98
AK8
D
225 231Right-handed alpha
Helix 99
AK9
D
231 245Right-handed alpha
Helix 100
AL1
D
258 273Right-handed alpha
Helix 101
AL2
D
277 281Right-handed 310
Helix 102
AL3
D
284 296Right-handed alpha
Helix 103
AL4
D
313 316Right-handed 310
Helix 104
AL5
D
319 329Right-handed alpha
Helix 105
AL6
D
336 343Right-handed alpha
Helix 106
AL7
D
364 391Right-handed alpha
Helix 107
AL8
D
397 415Right-handed alpha
Helix 108
AL9
D
420 425Right-handed alpha
Helix 109
AM1
D
433 447Right-handed alpha
Helix 110
AM2
D
453 457Right-handed 310
Helix 111
AM3
D
462 475Right-handed alpha
Helix 112
AM4
E
88 92Right-handed 310
Helix 113
AM5
E
138 145Right-handed alpha
Helix 114
AM6
E
162 178Right-handed alpha
Helix 115
AM7
E
190 204Right-handed alpha
Helix 116
AM8
E
225 248Right-handed alpha
Helix 117
AM9
E
258 273Right-handed alpha
Helix 118
AN1
E
284 293Right-handed alpha
Helix 119
AN2
E
319 329Right-handed alpha
Helix 120
AN3
E
336 342Right-handed alpha
Helix 121
AN4
E
359 364Right-handed alpha
Helix 122
AN5
E
364 392Right-handed alpha
Helix 123
AN6
E
397 415Right-handed alpha
Helix 124
AN7
E
421 426Right-handed alpha
Helix 125
AN8
E
433 446Right-handed alpha
Helix 126
AN9
E
453 457Right-handed 310
Helix 127
AO1
E
462 475Right-handed alpha
Helix 128
AO2
F
88 92Right-handed 310
Helix 129
AO3
F
138 145Right-handed alpha
Helix 130
AO4
F
158 161Right-handed 310
Helix 131
AO5
F
162 175Right-handed alpha
Helix 132
AO6
F
190 204Right-handed alpha
Helix 133
AO7
F
225 231Right-handed alpha
Helix 134
AO8
F
231 245Right-handed alpha
Helix 135
AO9
F
257 273Right-handed alpha
Helix 136
AP1
F
277 281Right-handed 310
Helix 137
AP2
F
284 294Right-handed alpha
Helix 138
AP3
F
312 316Right-handed 310
Helix 139
AP4
F
319 327Right-handed alpha
Helix 140
AP5
F
336 342Right-handed alpha
Helix 141
AP6
F
364 384Right-handed alpha
Helix 142
AP7
F
384 391Right-handed alpha
Helix 143
AP8
F
392 396Right-handed 310
Helix 144
AP9
F
397 415Right-handed alpha
Helix 145
AQ1
F
421 426Right-handed alpha
Helix 146
AQ2
F
433 446Right-handed alpha
Helix 147
AQ3
F
453 458Right-handed alpha
Helix 148
AQ4
F
462 475Right-handed alpha
Helix 149
AQ5
G
2 56Right-handed alpha
Helix 150
AQ6
G
86 102Right-handed alpha
Helix 151
AQ7
G
111 122Right-handed alpha
Helix 152
AQ8
G
139 155Right-handed alpha
Helix 153
AQ9
G
156 159Right-handed 310
Helix 154
AR1
G
184 191Right-handed alpha
Helix 155
AR2
G
204 276Right-handed alpha
Helix 156
AR3
H
91 97Right-handed 310
Helix 157
AR4
H
100 112Right-handed alpha
Helix 158
AR5
H
119 136Right-handed alpha
Helix 159
AR6
I
9 22Right-handed alpha
Helix 160
AR7
I
31 37Right-handed alpha
Helix 161
AR8
O
16 29Right-handed alpha
Helix 162
AR9
O
32 49Right-handed alpha
Helix 163
AS1
O
50 54Right-handed 310
Helix 164
AS2
O
64 78Right-handed alpha
Helix 165
AS3
O
83 95Right-handed alpha
Helix 166
AS4
O
101 117Right-handed alpha
Helix 167
AS5
O
130 144Right-handed alpha
Helix 168
AS6
O
145 148Right-handed 310
Helix 169
AS7
O
180 191Right-handed alpha
Helix 170
AS8
T
27 43Right-handed alpha
Helix 171
AS9
T
60 77Right-handed alpha
Helix 172
AT1
T
85 103Right-handed alpha
Helix 173
AT2
T
114 138Right-handed alpha
Helix 174
AT3
T
139 144Right-handed 310
Helix 175
AT4
T
151 155Right-handed 310
Helix 176
AT5
T
156 167Right-handed alpha
Helix 177
AT6
T
168 199Right-handed alpha
Helix 178
AT7
T
202 207Right-handed alpha
Helix 179
AT8
T
210 247Right-handed alpha
Helix 180
AT9
U
54 186Right-handed alpha
Helix 181
AU1
U
187 207Right-handed alpha
Helix 182
AU2
V
4 19Right-handed alpha
Helix 183
AU3
V
26 47Right-handed alpha
Helix 184
AU4
V
56 62Right-handed alpha
Helix 185
AU5
V
67 78Right-handed alpha
Helix 186
AU6
V
90 126Right-handed alpha
Helix 187
AU7
V
134 142Right-handed alpha
Helix 188
AU8
V
143 156Right-handed alpha
Helix 189
AU9
W
19 29Right-handed alpha
Helix 190
AV1
W
48 55Right-handed alpha
Helix 191
AV2
W
62 84Right-handed alpha
Helix 192
AV3
X
2 14Right-handed alpha
Helix 193
AV4
X
20 27Right-handed alpha
Helix 194
AV5
X
45 57Right-handed alpha
Helix 195
AV6
Y
13 35Right-handed alpha
Helix 196
AV7
Z
1 5Right-handed 310
Helix 197
AV8
Z
8 30Right-handed alpha
Helix 198
AV9
Z
30 48Right-handed alpha
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There are 32 sheets in PDB entry 7TKC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 37first strand
Strand 2
A
40 45anti-parallel
Strand 3
A
73 77anti-parallel
Strand 4
A
62 68anti-parallel
Strand 5
E
10 17anti-parallel
Strand 6
A
53 57first strand
Strand 7
A
90 96anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 37first strand
Strand 2
A
40 45anti-parallel
Strand 3
A
73 77anti-parallel
Strand 4
A
62 68anti-parallel
Strand 5
E
75 78first strand
Strand 6
E
36 41anti-parallel
Strand 7
E
44 55anti-parallel
Strand 8
E
58 63anti-parallel
Strand 9
E
20 25anti-parallel
Strand 10
E
10 17anti-parallel
Strand 11
A
53 57first strand
Strand 12
A
90 96anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
98 101first strand
Strand 2
A
127 130anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 111first strand
Strand 2
A
232 237parallel
Strand 3
A
204 210parallel
Strand 4
A
267 271parallel
Strand 5
A
324 325parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
169 172first strand
Strand 2
A
328 331parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
351 353first strand
Strand 2
A
368 373anti-parallel
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There are 12 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
36 39first strand
Strand 2
F
46 53anti-parallel
Strand 3
F
58 63anti-parallel
Strand 4
F
20 25anti-parallel
Strand 5
F
11 17anti-parallel
Strand 6
B
62 68anti-parallel
Strand 7
B
73 78anti-parallel
Strand 8
B
40 45anti-parallel
Strand 9
B
30 37anti-parallel
Strand 10
B
89 96anti-parallel
Strand 11
B
53 56anti-parallel
Strand 12
B
62 68anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
98 101first strand
Strand 2
B
127 130anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
109 111first strand
Strand 2
B
231 236parallel
Strand 3
B
202 208parallel
Strand 4
B
266 271parallel
Strand 5
B
324 330parallel
Strand 6
B
169 171parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
147 148first strand
Strand 2
B
161 162anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
351 352first strand
Strand 2
B
372 373anti-parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
30 37first strand
Strand 2
C
40 45anti-parallel
Strand 3
C
74 77anti-parallel
Strand 4
C
62 67anti-parallel
Strand 5
C
53 57anti-parallel
Strand 6
C
89 96anti-parallel
Strand 7
C
30 37anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
98 100first strand
Strand 2
C
128 130anti-parallel
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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
108 110first strand
Strand 2
C
231 236parallel
Strand 3
C
201 208parallel
Strand 4
C
265 271parallel
Strand 5
C
323 331parallel
Strand 6
C
167 172parallel
Strand 7
C
350 353parallel
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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
11 17first strand
Strand 2
D
20 25anti-parallel
Strand 3
D
58 63anti-parallel
Strand 4
D
44 53anti-parallel
Strand 5
D
36 41anti-parallel
Strand 6
D
75 78anti-parallel
Strand 7
D
11 17anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
84 87first strand
Strand 2
D
113 116anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
95 96first strand
Strand 2
D
216 221parallel
Strand 3
D
182 189parallel
Strand 4
D
252 256parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
306 311first strand
Strand 2
D
152 157parallel
Strand 3
D
331 335parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
84 87first strand
Strand 2
E
113 116anti-parallel
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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
101 102first strand
Strand 2
E
95 97anti-parallel
Strand 3
E
215 221parallel
Strand 4
E
182 189parallel
Strand 5
E
253 257parallel
Strand 6
E
306 309parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
133 134first strand
Strand 2
E
147 148anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
153 156first strand
Strand 2
E
331 334parallel
Strand 3
E
354 355anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
84 87first strand
Strand 2
F
113 116anti-parallel
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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
95 96first strand
Strand 2
F
215 219parallel
Strand 3
F
182 186parallel
Strand 4
F
252 256parallel
Strand 5
F
305 310parallel
Strand 6
F
152 156parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
133 134first strand
Strand 2
F
147 148anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
331 335first strand
Strand 2
F
348 355anti-parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
73 77first strand
Strand 2
G
106 110parallel
Strand 3
G
128 129parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
162 171first strand
Strand 2
G
174 182anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
12 15first strand
Strand 2
H
83 87parallel
Strand 3
H
73 77anti-parallel
Strand 4
H
48 52anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
37 42first strand
Strand 2
H
29 34anti-parallel
Strand 3
H
55 60anti-parallel
Strand 4
H
66 70anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
43 44first strand
Strand 2
I
59 60anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
152 159first strand
Strand 2
O
118 125parallel
Strand 3
O
166 171anti-parallel
Strand 4
O
174 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il