Analysis of interatomic Contacts of Structural Units in PDB entry:
7TKF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TKF entry

There are 27 chains in PDB entry 7TKF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
0	MET 1	GLY 75
1	MET 1	GLY 75
2	MET 1	GLY 75
3	GLN 2	GLY 75
4	MET 1	GLY 75
5	MET 1	GLY 75
6	GLN 2	GLY 75
7	MET 1	LEU 73
8	MET 1	GLY 75
9	GLN 2	GLY 75
A	GLU 9	THR 509
B	THR 3	THR 509
C	SER 12	THR 509
D	THR 7	ALA 475
E	SER 6	ALA 475
F	PRO 8	ALA 475
G	ALA 1	SER 276
H	LYS 11	VAL 136
I	ILE 8	LYS 61
O	PRO 7	ASP 193
T	LEU 26	HIS 249
U	ASN 53	LYS 207
V	ALA 3	MET 173
W	VAL 1	HIS 85
X	ASN 1	HIS 62
Y	MET 1	THR 37
Z	MET 1	LEU 48

There are188 helices in PDB entry 7TKF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	0	1	17	Right-handed alpha
Helix 2	AA2	0	19	40	Right-handed alpha
Helix 3	AA3	0	43	75	Right-handed alpha
Helix 4	AA4	1	2	17	Right-handed alpha
Helix 5	AA5	1	19	40	Right-handed alpha
Helix 6	AA6	1	43	75	Right-handed alpha
Helix 7	AA7	2	2	16	Right-handed alpha
Helix 8	AA8	2	18	40	Right-handed alpha
Helix 9	AA9	2	43	75	Right-handed alpha
Helix 10	AB1	3	3	17	Right-handed alpha
Helix 11	AB2	3	18	40	Right-handed alpha
Helix 12	AB3	3	43	75	Right-handed alpha
Helix 13	AB4	4	2	16	Right-handed alpha
Helix 14	AB5	4	18	40	Right-handed alpha
Helix 15	AB6	4	43	74	Right-handed alpha
Helix 16	AB7	5	2	16	Right-handed alpha
Helix 17	AB8	5	18	40	Right-handed alpha
Helix 18	AB9	5	43	75	Right-handed alpha
Helix 19	AC1	6	3	40	Right-handed alpha
Helix 20	AC2	6	43	75	Right-handed alpha
Helix 21	AC3	7	2	40	Right-handed alpha
Helix 22	AC4	7	43	73	Right-handed alpha
Helix 23	AC5	8	2	40	Right-handed alpha
Helix 24	AC6	8	43	75	Right-handed alpha
Helix 25	AC7	9	3	16	Right-handed alpha
Helix 26	AC8	9	18	40	Right-handed alpha
Helix 27	AC9	9	43	75	Right-handed alpha
Helix 28	AD1	A	10	20	Right-handed alpha
Helix 29	AD2	A	152	159	Right-handed alpha
Helix 30	AD3	A	176	194	Right-handed alpha
Helix 31	AD4	A	211	225	Right-handed alpha
Helix 32	AD5	A	241	263	Right-handed alpha
Helix 33	AD6	A	272	286	Right-handed alpha
Helix 34	AD7	A	292	296	Right-handed 310
Helix 35	AD8	A	297	298	Right-handed 310
Helix 36	AD9	A	299	309	Right-handed alpha
Helix 37	AE1	A	315	319	Right-handed 310
Helix 38	AE2	A	331	335	Right-handed 310
Helix 39	AE3	A	338	348	Right-handed alpha
Helix 40	AE4	A	355	362	Right-handed alpha
Helix 41	AE5	A	376	381	Right-handed 310
Helix 42	AE6	A	382	389	Right-handed alpha
Helix 43	AE7	A	391	407	Right-handed alpha
Helix 44	AE8	A	413	431	Right-handed alpha
Helix 45	AE9	A	439	442	Right-handed 310
Helix 46	AF1	A	443	452	Right-handed alpha
Helix 47	AF2	A	453	458	Right-handed alpha
Helix 48	AF3	A	459	461	Right-handed 310
Helix 49	AF4	A	462	477	Right-handed alpha
Helix 50	AF5	A	478	489	Right-handed alpha
Helix 51	AF6	A	492	506	Right-handed alpha
Helix 52	AF7	B	10	19	Right-handed alpha
Helix 53	AF8	B	25	29	Right-handed 310
Helix 54	AF9	B	152	159	Right-handed alpha
Helix 55	AG1	B	176	194	Right-handed alpha
Helix 56	AG2	B	211	225	Right-handed alpha
Helix 57	AG3	B	241	262	Right-handed alpha
Helix 58	AG4	B	272	287	Right-handed alpha
Helix 59	AG5	B	292	296	Right-handed 310
Helix 60	AG6	B	299	309	Right-handed alpha
Helix 61	AG7	B	315	319	Right-handed 310
Helix 62	AG8	B	338	348	Right-handed alpha
Helix 63	AG9	B	355	361	Right-handed alpha
Helix 64	AH1	B	376	380	Right-handed 310
Helix 65	AH2	B	382	388	Right-handed alpha
Helix 66	AH3	B	389	402	Right-handed alpha
Helix 67	AH4	B	403	405	Right-handed 310
Helix 68	AH5	B	413	430	Right-handed alpha
Helix 69	AH6	B	439	452	Right-handed alpha
Helix 70	AH7	B	453	458	Right-handed alpha
Helix 71	AH8	B	462	478	Right-handed alpha
Helix 72	AH9	B	478	489	Right-handed alpha
Helix 73	AI1	B	492	509	Right-handed alpha
Helix 74	AI2	C	13	21	Right-handed alpha
Helix 75	AI3	C	80	84	Right-handed 310
Helix 76	AI4	C	176	188	Right-handed alpha
Helix 77	AI5	C	211	225	Right-handed alpha
Helix 78	AI6	C	227	229	Right-handed 310
Helix 79	AI7	C	241	247	Right-handed alpha
Helix 80	AI8	C	247	261	Right-handed alpha
Helix 81	AI9	C	272	287	Right-handed alpha
Helix 82	AJ1	C	292	296	Right-handed 310
Helix 83	AJ2	C	299	309	Right-handed alpha
Helix 84	AJ3	C	315	319	Right-handed 310
Helix 85	AJ4	C	338	348	Right-handed alpha
Helix 86	AJ5	C	355	361	Right-handed alpha
Helix 87	AJ6	C	383	388	Right-handed alpha
Helix 88	AJ7	C	391	407	Right-handed alpha
Helix 89	AJ8	C	413	431	Right-handed alpha
Helix 90	AJ9	C	439	452	Right-handed alpha
Helix 91	AK1	C	460	478	Right-handed alpha
Helix 92	AK2	C	479	489	Right-handed alpha
Helix 93	AK3	C	492	509	Right-handed alpha
Helix 94	AK4	D	138	145	Right-handed alpha
Helix 95	AK5	D	162	175	Right-handed alpha
Helix 96	AK6	D	190	204	Right-handed alpha
Helix 97	AK7	D	225	245	Right-handed alpha
Helix 98	AK8	D	257	273	Right-handed alpha
Helix 99	AK9	D	284	295	Right-handed alpha
Helix 100	AL1	D	313	316	Right-handed 310
Helix 101	AL2	D	319	327	Right-handed alpha
Helix 102	AL3	D	336	342	Right-handed alpha
Helix 103	AL4	D	363	384	Right-handed alpha
Helix 104	AL5	D	384	391	Right-handed alpha
Helix 105	AL6	D	397	415	Right-handed alpha
Helix 106	AL7	D	421	426	Right-handed alpha
Helix 107	AL8	D	433	446	Right-handed alpha
Helix 108	AL9	D	453	458	Right-handed alpha
Helix 109	AM1	D	462	475	Right-handed alpha
Helix 110	AM2	E	138	145	Right-handed alpha
Helix 111	AM3	E	162	178	Right-handed alpha
Helix 112	AM4	E	190	204	Right-handed alpha
Helix 113	AM5	E	225	246	Right-handed alpha
Helix 114	AM6	E	257	273	Right-handed alpha
Helix 115	AM7	E	277	281	Right-handed 310
Helix 116	AM8	E	284	296	Right-handed alpha
Helix 117	AM9	E	313	316	Right-handed 310
Helix 118	AN1	E	319	329	Right-handed alpha
Helix 119	AN2	E	336	343	Right-handed alpha
Helix 120	AN3	E	364	384	Right-handed alpha
Helix 121	AN4	E	384	391	Right-handed alpha
Helix 122	AN5	E	397	415	Right-handed alpha
Helix 123	AN6	E	418	422	Right-handed 310
Helix 124	AN7	E	433	447	Right-handed alpha
Helix 125	AN8	E	453	457	Right-handed 310
Helix 126	AN9	E	462	475	Right-handed alpha
Helix 127	AO1	F	138	145	Right-handed alpha
Helix 128	AO2	F	158	161	Right-handed 310
Helix 129	AO3	F	162	178	Right-handed alpha
Helix 130	AO4	F	190	204	Right-handed alpha
Helix 131	AO5	F	225	248	Right-handed alpha
Helix 132	AO6	F	258	273	Right-handed alpha
Helix 133	AO7	F	284	293	Right-handed alpha
Helix 134	AO8	F	319	329	Right-handed alpha
Helix 135	AO9	F	336	341	Right-handed alpha
Helix 136	AP1	F	364	392	Right-handed alpha
Helix 137	AP2	F	397	415	Right-handed alpha
Helix 138	AP3	F	421	426	Right-handed alpha
Helix 139	AP4	F	433	446	Right-handed alpha
Helix 140	AP5	F	453	457	Right-handed 310
Helix 141	AP6	F	462	475	Right-handed alpha
Helix 142	AP7	G	2	56	Right-handed alpha
Helix 143	AP8	G	86	98	Right-handed alpha
Helix 144	AP9	G	111	122	Right-handed alpha
Helix 145	AQ1	G	139	155	Right-handed alpha
Helix 146	AQ2	G	156	159	Right-handed 310
Helix 147	AQ3	G	184	191	Right-handed alpha
Helix 148	AQ4	G	204	276	Right-handed alpha
Helix 149	AQ5	H	100	115	Right-handed alpha
Helix 150	AQ6	H	119	136	Right-handed alpha
Helix 151	AQ7	I	9	22	Right-handed alpha
Helix 152	AQ8	I	31	37	Right-handed alpha
Helix 153	AQ9	O	17	29	Right-handed alpha
Helix 154	AR1	O	33	49	Right-handed alpha
Helix 155	AR2	O	64	78	Right-handed alpha
Helix 156	AR3	O	83	95	Right-handed alpha
Helix 157	AR4	O	98	100	Right-handed 310
Helix 158	AR5	O	101	117	Right-handed alpha
Helix 159	AR6	O	130	144	Right-handed alpha
Helix 160	AR7	O	180	191	Right-handed alpha
Helix 161	AR8	T	27	43	Right-handed alpha
Helix 162	AR9	T	58	74	Right-handed alpha
Helix 163	AS1	T	82	84	Right-handed 310
Helix 164	AS2	T	85	99	Right-handed alpha
Helix 165	AS3	T	114	138	Right-handed alpha
Helix 166	AS4	T	139	146	Right-handed 310
Helix 167	AS5	T	151	155	Right-handed 310
Helix 168	AS6	T	156	167	Right-handed alpha
Helix 169	AS7	T	168	201	Right-handed alpha
Helix 170	AS8	T	210	247	Right-handed alpha
Helix 171	AS9	U	55	184	Right-handed alpha
Helix 172	AT1	U	187	206	Right-handed alpha
Helix 173	AT2	V	4	19	Right-handed alpha
Helix 174	AT3	V	26	48	Right-handed alpha
Helix 175	AT4	V	57	62	Right-handed alpha
Helix 176	AT5	V	67	78	Right-handed alpha
Helix 177	AT6	V	90	127	Right-handed alpha
Helix 178	AT7	V	134	142	Right-handed alpha
Helix 179	AT8	V	143	156	Right-handed alpha
Helix 180	AT9	W	18	30	Right-handed alpha
Helix 181	AU1	W	48	56	Right-handed alpha
Helix 182	AU2	W	63	84	Right-handed alpha
Helix 183	AU3	X	2	14	Right-handed alpha
Helix 184	AU4	X	20	26	Right-handed alpha
Helix 185	AU5	X	47	57	Right-handed alpha
Helix 186	AU6	Y	13	35	Right-handed alpha
Helix 187	AU7	Z	8	30	Right-handed alpha
Helix 188	AU8	Z	32	48	Right-handed alpha

There are 32 sheets in PDB entry 7TKF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	27	first strand
Strand 2	O	174	178	anti-parallel
Strand 3	O	167	171	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	37	first strand
Strand 2	A	40	45	anti-parallel
Strand 3	A	72	77	anti-parallel
Strand 4	A	62	67	anti-parallel
Strand 5	A	53	57	anti-parallel
Strand 6	A	89	96	anti-parallel
Strand 7	A	30	37	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	101	first strand
Strand 2	A	127	130	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	232	236	parallel
Strand 3	A	204	208	parallel
Strand 4	A	266	271	parallel
Strand 5	A	323	327	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	148	first strand
Strand 2	A	161	162	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	170	first strand
Strand 2	A	350	353	parallel
Strand 3	A	373	374	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	16	17	first strand
Strand 2	B	62	68	anti-parallel
Strand 3	B	73	77	anti-parallel
Strand 4	B	40	45	anti-parallel
Strand 5	B	31	37	anti-parallel
Strand 6	B	89	96	anti-parallel
Strand 7	B	53	57	anti-parallel
Strand 8	B	62	68	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	101	first strand
Strand 2	B	127	130	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	232	236	parallel
Strand 3	B	204	208	parallel
Strand 4	B	267	271	parallel
Strand 5	B	324	325	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	172	first strand
Strand 2	B	328	331	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	354	first strand
Strand 2	B	367	374	anti-parallel

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There are 13 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	36	41	anti-parallel
Strand 3	D	44	53	anti-parallel
Strand 4	D	59	63	anti-parallel
Strand 5	D	20	25	anti-parallel
Strand 6	D	11	17	anti-parallel
Strand 7	C	62	69	anti-parallel
Strand 8	C	72	78	anti-parallel
Strand 9	C	40	45	anti-parallel
Strand 10	C	30	36	anti-parallel
Strand 11	C	89	96	anti-parallel
Strand 12	C	53	56	anti-parallel
Strand 13	C	62	69	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	101	first strand
Strand 2	C	127	130	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	111	first strand
Strand 2	C	231	236	parallel
Strand 3	C	203	208	parallel
Strand 4	C	267	271	parallel
Strand 5	C	322	331	parallel
Strand 6	C	169	172	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	111	first strand
Strand 2	C	231	236	parallel
Strand 3	C	203	208	parallel
Strand 4	C	267	271	parallel
Strand 5	C	322	331	parallel
Strand 6	C	312	313	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	148	first strand
Strand 2	C	161	162	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	351	354	first strand
Strand 2	C	367	373	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	87	first strand
Strand 2	D	113	116	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	95	96	first strand
Strand 2	D	216	221	parallel
Strand 3	D	183	189	parallel
Strand 4	D	251	256	parallel
Strand 5	D	304	311	parallel
Strand 6	D	152	157	parallel
Strand 7	D	331	334	parallel
Strand 8	D	354	355	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	134	first strand
Strand 2	D	147	148	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	17	first strand
Strand 2	E	20	25	anti-parallel
Strand 3	E	58	63	anti-parallel
Strand 4	E	45	53	anti-parallel
Strand 5	E	36	40	anti-parallel
Strand 6	E	77	78	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	84	87	first strand
Strand 2	E	113	116	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	219	first strand
Strand 2	E	182	186	parallel
Strand 3	E	250	256	parallel
Strand 4	E	303	304	parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	216	219	first strand
Strand 2	E	182	186	parallel
Strand 3	E	250	256	parallel
Strand 4	E	306	311	parallel
Strand 5	E	152	157	parallel
Strand 6	E	331	335	parallel
Strand 7	E	348	353	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	21	first strand
Strand 2	F	58	63	anti-parallel
Strand 3	F	44	55	anti-parallel
Strand 4	F	36	41	anti-parallel
Strand 5	F	75	78	anti-parallel
Strand 6	F	10	13	anti-parallel
Strand 7	F	23	25	anti-parallel
Strand 8	F	58	63	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	84	87	first strand
Strand 2	F	113	116	anti-parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	95	96	first strand
Strand 2	F	217	221	parallel
Strand 3	F	183	189	parallel
Strand 4	F	253	257	parallel
Strand 5	F	306	309	parallel
Strand 6	F	152	156	parallel
Strand 7	F	331	334	parallel
Strand 8	F	354	355	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	134	first strand
Strand 2	F	147	148	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	176	181	first strand
Strand 2	G	162	168	anti-parallel
Strand 3	G	73	77	parallel
Strand 4	G	106	110	parallel
Strand 5	G	126	131	parallel
Strand 6	I	43	46	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	15	first strand
Strand 2	H	83	87	parallel
Strand 3	H	73	77	anti-parallel
Strand 4	H	50	52	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	37	42	first strand
Strand 2	H	29	34	anti-parallel
Strand 3	H	55	61	anti-parallel
Strand 4	H	64	70	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	121	122	first strand
Strand 2	O	155	156	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TKF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TKF