Analysis of interatomic Contacts of Structural Units in PDB entry:
7TLH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TLH entry

There are 4 chains in PDB entry 7TLH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 147ASP 270
C
 ALA 147ASP 270
A
 ALA 147ASP 270
D
 ALA 13ASP 136
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7TLH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
152 163Right-handed alpha
Helix 2
AA2
B
218 220Right-handed 310
Helix 3
AA3
B
246 260Right-handed alpha
Helix 4
AA4
C
152 163Right-handed alpha
Helix 5
AA5
C
218 220Right-handed 310
Helix 6
AA6
C
246 260Right-handed alpha
Helix 7
AA7
A
152 163Right-handed alpha
Helix 8
AA8
A
218 220Right-handed 310
Helix 9
AA9
A
246 260Right-handed alpha
Helix 10
AB1
D
18 29Right-handed alpha
Helix 11
AB2
D
84 86Right-handed 310
Helix 12
AB3
D
112 126Right-handed alpha
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There are 4 sheets in PDB entry 7TLH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 177first strand
Strand 2
B
182 195anti-parallel
Strand 3
B
209 216anti-parallel
Strand 4
B
238 243parallel
Strand 5
B
227 235anti-parallel
Strand 6
B
165 177anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
165 177first strand
Strand 2
C
182 195anti-parallel
Strand 3
C
210 216anti-parallel
Strand 4
C
238 243parallel
Strand 5
C
228 235anti-parallel
Strand 6
C
165 177anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 177first strand
Strand 2
A
182 195anti-parallel
Strand 3
A
210 216anti-parallel
Strand 4
A
238 243parallel
Strand 5
A
227 235anti-parallel
Strand 6
A
165 177anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
31 43first strand
Strand 2
D
48 61anti-parallel
Strand 3
D
76 82anti-parallel
Strand 4
D
104 109parallel
Strand 5
D
93 101anti-parallel
Strand 6
D
31 43anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il