Analysis of interatomic Contacts of Structural Units in PDB entry:
7TLJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7TLJ entry

There are 8 chains in PDB entry 7TLJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 3	ALA 430
B	ALA 1	LYS 256
C	GLY 9	GLY 187
D	TRP 79	PHE 102
E	GLY 3	ALA 430
F	ALA 1	LYS 256
G	GLY 9	GLY 187
H	TRP 79	PHE 102

There are 73 helices in PDB entry 7TLJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	21	Right-handed alpha
Helix 2	AA2	A	24	34	Right-handed alpha
Helix 3	AA3	A	42	45	Right-handed 310
Helix 4	AA4	A	46	67	Right-handed alpha
Helix 5	AA5	A	75	86	Right-handed alpha
Helix 6	AA6	A	89	118	Right-handed alpha
Helix 7	AA7	A	125	149	Right-handed alpha
Helix 8	AA8	A	152	168	Right-handed alpha
Helix 9	AA9	A	172	182	Right-handed alpha
Helix 10	AB1	A	187	220	Right-handed alpha
Helix 11	AB2	A	233	240	Right-handed alpha
Helix 12	AB3	A	246	270	Right-handed alpha
Helix 13	AB4	A	276	281	Right-handed 310
Helix 14	AB5	A	298	308	Right-handed alpha
Helix 15	AB6	A	312	322	Right-handed alpha
Helix 16	AB7	A	327	345	Right-handed alpha
Helix 17	AB8	A	345	350	Right-handed alpha
Helix 18	AB9	A	356	360	Right-handed 310
Helix 19	AC1	A	362	382	Right-handed alpha
Helix 20	AC2	A	388	406	Right-handed alpha
Helix 21	AC3	A	406	415	Right-handed alpha
Helix 22	AC4	A	423	429	Right-handed alpha
Helix 23	AC5	B	21	35	Right-handed alpha
Helix 24	AC6	B	36	39	Right-handed 310
Helix 25	AC7	B	46	52	Right-handed 310
Helix 26	AC8	B	59	68	Right-handed alpha
Helix 27	AC9	B	102	107	Right-handed alpha
Helix 28	AD1	B	117	124	Right-handed alpha
Helix 29	AD2	B	126	136	Right-handed alpha
Helix 30	AD3	B	203	220	Right-handed alpha
Helix 31	AD4	B	222	256	Right-handed alpha
Helix 32	AD5	C	10	37	Right-handed alpha
Helix 33	AD6	C	41	46	Right-handed alpha
Helix 34	AD7	C	78	88	Right-handed alpha
Helix 35	AD8	C	110	115	Right-handed 310
Helix 36	AD9	D	81	100	Right-handed alpha
Helix 37	AE1	E	13	21	Right-handed alpha
Helix 38	AE2	E	24	34	Right-handed alpha
Helix 39	AE3	E	42	45	Right-handed 310
Helix 40	AE4	E	46	67	Right-handed alpha
Helix 41	AE5	E	75	86	Right-handed alpha
Helix 42	AE6	E	89	119	Right-handed alpha
Helix 43	AE7	E	125	149	Right-handed alpha
Helix 44	AE8	E	152	168	Right-handed alpha
Helix 45	AE9	E	172	182	Right-handed alpha
Helix 46	AF1	E	187	220	Right-handed alpha
Helix 47	AF2	E	233	240	Right-handed alpha
Helix 48	AF3	E	246	270	Right-handed alpha
Helix 49	AF4	E	276	281	Right-handed 310
Helix 50	AF5	E	298	308	Right-handed alpha
Helix 51	AF6	E	312	322	Right-handed alpha
Helix 52	AF7	E	327	350	Right-handed alpha
Helix 53	AF8	E	356	359	Right-handed 310
Helix 54	AF9	E	360	382	Right-handed alpha
Helix 55	AG1	E	388	406	Right-handed alpha
Helix 56	AG2	E	406	415	Right-handed alpha
Helix 57	AG3	E	423	429	Right-handed alpha
Helix 58	AG4	F	21	35	Right-handed alpha
Helix 59	AG5	F	36	39	Right-handed 310
Helix 60	AG6	F	46	51	Right-handed 310
Helix 61	AG7	F	59	69	Right-handed alpha
Helix 62	AG8	F	102	107	Right-handed alpha
Helix 63	AG9	F	117	124	Right-handed alpha
Helix 64	AH1	F	126	136	Right-handed alpha
Helix 65	AH2	F	143	147	Right-handed 310
Helix 66	AH3	F	166	170	Right-handed 310
Helix 67	AH4	F	203	220	Right-handed alpha
Helix 68	AH5	F	222	253	Right-handed alpha
Helix 69	AH6	G	11	37	Right-handed alpha
Helix 70	AH7	G	41	46	Right-handed alpha
Helix 71	AH8	G	78	88	Right-handed alpha
Helix 72	AH9	G	110	114	Right-handed 310
Helix 73	AI1	H	81	100	Right-handed alpha

There are 12 sheets in PDB entry 7TLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	38	first strand
Strand 2	A	241	243	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	73	first strand
Strand 2	B	80	82	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	157	first strand
Strand 2	B	181	183	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	53	first strand
Strand 2	C	183	186	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	67	first strand
Strand 2	C	70	76	anti-parallel
Strand 3	C	122	126	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	141	first strand
Strand 2	C	146	149	anti-parallel
Strand 3	C	154	156	anti-parallel
Strand 4	C	162	164	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	36	38	first strand
Strand 2	E	241	243	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	73	first strand
Strand 2	F	80	82	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	155	157	first strand
Strand 2	F	181	183	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	50	53	first strand
Strand 2	G	183	186	anti-parallel
Strand 3	G	176	180	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	62	67	first strand
Strand 2	G	70	76	anti-parallel
Strand 3	G	122	126	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	137	141	first strand
Strand 2	G	146	149	anti-parallel
Strand 3	G	154	156	anti-parallel
Strand 4	G	162	164	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7TLJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7TLJ