Analysis of interatomic Contacts of Structural Units in PDB entry:
7TLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TLR entry

There are 2 chains in PDB entry 7TLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0PHE 416
B
 MET 1PHE 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7TLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 11Right-handed alpha
Helix 2
AA2
A
14 17Right-handed 310
Helix 3
AA3
A
18 23Right-handed alpha
Helix 4
AA4
A
39 53Right-handed alpha
Helix 5
AA5
A
66 83Right-handed alpha
Helix 6
AA6
A
93 95Right-handed 310
Helix 7
AA7
A
102 119Right-handed alpha
Helix 8
AA8
A
132 135Right-handed 310
Helix 9
AA9
A
136 147Right-handed alpha
Helix 10
AB1
A
162 170Right-handed alpha
Helix 11
AB2
A
191 202Right-handed alpha
Helix 12
AB3
A
220 225Right-handed alpha
Helix 13
AB4
A
234 236Right-handed 310
Helix 14
AB5
A
248 255Right-handed alpha
Helix 15
AB6
A
279 283Right-handed 310
Helix 16
AB7
A
288 305Right-handed alpha
Helix 17
AB8
A
306 327Right-handed alpha
Helix 18
AB9
A
338 342Right-handed 310
Helix 19
AC1
A
354 365Right-handed alpha
Helix 20
AC2
A
376 383Right-handed alpha
Helix 21
AC3
A
398 416Right-handed alpha
Helix 22
AC4
B
2 11Right-handed alpha
Helix 23
AC5
B
14 17Right-handed 310
Helix 24
AC6
B
18 23Right-handed alpha
Helix 25
AC7
B
39 53Right-handed alpha
Helix 26
AC8
B
54 57Right-handed 310
Helix 27
AC9
B
68 83Right-handed alpha
Helix 28
AD1
B
93 95Right-handed 310
Helix 29
AD2
B
102 119Right-handed alpha
Helix 30
AD3
B
132 135Right-handed 310
Helix 31
AD4
B
136 147Right-handed alpha
Helix 32
AD5
B
162 170Right-handed alpha
Helix 33
AD6
B
191 202Right-handed alpha
Helix 34
AD7
B
220 225Right-handed alpha
Helix 35
AD8
B
234 236Right-handed 310
Helix 36
AD9
B
248 255Right-handed alpha
Helix 37
AE1
B
279 283Right-handed 310
Helix 38
AE2
B
288 306Right-handed alpha
Helix 39
AE3
B
306 327Right-handed alpha
Helix 40
AE4
B
338 342Right-handed 310
Helix 41
AE5
B
354 365Right-handed alpha
Helix 42
AE6
B
376 383Right-handed alpha
Helix 43
AE7
B
398 416Right-handed alpha
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There are 8 sheets in PDB entry 7TLR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
367 368parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
243 247anti-parallel
Strand 3
A
228 232anti-parallel
Strand 4
A
205 209parallel
Strand 5
A
174 180parallel
Strand 6
A
124 128parallel
Strand 7
A
149 153parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 268first strand
Strand 2
A
273 275anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 334first strand
Strand 2
A
345 350anti-parallel
Strand 3
A
388 392anti-parallel
Strand 4
A
370 372anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
367 368parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
243 247anti-parallel
Strand 3
B
228 232anti-parallel
Strand 4
B
205 209parallel
Strand 5
B
174 180parallel
Strand 6
B
124 128parallel
Strand 7
B
149 153parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 268first strand
Strand 2
B
273 275anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 333first strand
Strand 2
B
345 350anti-parallel
Strand 3
B
388 392anti-parallel
Strand 4
B
370 372anti-parallel
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