Analysis of interatomic Contacts of Structural Units in PDB entry:
7TM7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TM7 entry

There are 2 chains in PDB entry 7TM7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -5ARG 796
B
 GLN 3ARG 796
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 7TM7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 22Right-handed alpha
Helix 2
AA2
A
26 30Right-handed 310
Helix 3
AA3
A
31 49Right-handed alpha
Helix 4
AA4
A
74 83Right-handed alpha
Helix 5
AA5
A
84 94Right-handed alpha
Helix 6
AA6
A
98 104Right-handed alpha
Helix 7
AA7
A
114 131Right-handed alpha
Helix 8
AA8
A
163 167Right-handed 310
Helix 9
AA9
A
174 177Right-handed 310
Helix 10
AB1
A
230 236Right-handed alpha
Helix 11
AB2
A
240 242Right-handed 310
Helix 12
AB3
A
243 251Right-handed alpha
Helix 13
AB4
A
252 254Right-handed 310
Helix 14
AB5
A
262 291Right-handed alpha
Helix 15
AB6
A
294 296Right-handed 310
Helix 16
AB7
A
297 301Right-handed alpha
Helix 17
AB8
A
313 327Right-handed alpha
Helix 18
AB9
A
329 338Right-handed alpha
Helix 19
AC1
A
349 353Right-handed 310
Helix 20
AC2
A
358 365Right-handed alpha
Helix 21
AC3
A
365 387Right-handed alpha
Helix 22
AC4
A
390 398Right-handed alpha
Helix 23
AC5
A
407 415Right-handed alpha
Helix 24
AC6
A
422 432Right-handed alpha
Helix 25
AC7
A
434 441Right-handed alpha
Helix 26
AC8
A
453 458Right-handed alpha
Helix 27
AC9
A
462 474Right-handed alpha
Helix 28
AD1
A
480 492Right-handed 310
Helix 29
AD2
A
493 520Right-handed alpha
Helix 30
AD3
A
537 540Right-handed 310
Helix 31
AD4
A
541 559Right-handed alpha
Helix 32
AD5
A
579 598Right-handed alpha
Helix 33
AD6
A
602 604Right-handed 310
Helix 34
AD7
A
615 623Right-handed alpha
Helix 35
AD8
A
624 626Right-handed 310
Helix 36
AD9
A
641 650Right-handed alpha
Helix 37
AE1
A
660 670Right-handed alpha
Helix 38
AE2
A
671 674Right-handed 310
Helix 39
AE3
A
680 690Right-handed alpha
Helix 40
AE4
A
693 700Right-handed alpha
Helix 41
AE5
A
701 713Right-handed alpha
Helix 42
AE6
A
724 732Right-handed alpha
Helix 43
AE7
A
739 759Right-handed alpha
Helix 44
AE8
A
760 775Right-handed alpha
Helix 45
AE9
A
776 778Right-handed 310
Helix 46
AF1
A
779 791Right-handed alpha
Helix 47
AF2
B
7 22Right-handed alpha
Helix 48
AF3
B
26 30Right-handed 310
Helix 49
AF4
B
31 50Right-handed alpha
Helix 50
AF5
B
74 83Right-handed alpha
Helix 51
AF6
B
84 94Right-handed alpha
Helix 52
AF7
B
98 104Right-handed alpha
Helix 53
AF8
B
114 131Right-handed alpha
Helix 54
AF9
B
163 167Right-handed 310
Helix 55
AG1
B
174 177Right-handed 310
Helix 56
AG2
B
230 236Right-handed alpha
Helix 57
AG3
B
240 242Right-handed 310
Helix 58
AG4
B
243 251Right-handed alpha
Helix 59
AG5
B
252 254Right-handed 310
Helix 60
AG6
B
262 291Right-handed alpha
Helix 61
AG7
B
294 296Right-handed 310
Helix 62
AG8
B
297 301Right-handed alpha
Helix 63
AG9
B
313 327Right-handed alpha
Helix 64
AH1
B
329 338Right-handed alpha
Helix 65
AH2
B
349 353Right-handed 310
Helix 66
AH3
B
358 365Right-handed alpha
Helix 67
AH4
B
365 387Right-handed alpha
Helix 68
AH5
B
390 398Right-handed alpha
Helix 69
AH6
B
407 415Right-handed alpha
Helix 70
AH7
B
422 432Right-handed alpha
Helix 71
AH8
B
434 441Right-handed alpha
Helix 72
AH9
B
453 458Right-handed alpha
Helix 73
AI1
B
462 473Right-handed alpha
Helix 74
AI2
B
480 492Right-handed 310
Helix 75
AI3
B
493 520Right-handed alpha
Helix 76
AI4
B
537 540Right-handed 310
Helix 77
AI5
B
541 558Right-handed alpha
Helix 78
AI6
B
579 599Right-handed alpha
Helix 79
AI7
B
602 604Right-handed 310
Helix 80
AI8
B
615 623Right-handed alpha
Helix 81
AI9
B
624 626Right-handed 310
Helix 82
AJ1
B
641 650Right-handed alpha
Helix 83
AJ2
B
660 670Right-handed alpha
Helix 84
AJ3
B
671 674Right-handed 310
Helix 85
AJ4
B
680 691Right-handed alpha
Helix 86
AJ5
B
693 700Right-handed alpha
Helix 87
AJ6
B
701 713Right-handed alpha
Helix 88
AJ7
B
724 732Right-handed alpha
Helix 89
AJ8
B
739 760Right-handed alpha
Helix 90
AJ9
B
760 775Right-handed alpha
Helix 91
AK1
B
776 778Right-handed 310
Helix 92
AK2
B
779 791Right-handed alpha
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There are 12 sheets in PDB entry 7TM7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
196 208anti-parallel
Strand 3
A
178 182anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
196 208anti-parallel
Strand 3
A
215 224anti-parallel
Strand 4
A
134 139parallel
Strand 5
A
61 65parallel
Strand 6
A
302 307parallel
Strand 7
A
341 344parallel
Strand 8
A
417 420parallel
Strand 9
A
445 447parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 151first strand
Strand 2
A
154 158anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
192 193anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
404 406anti-parallel
Strand 3
A
400 401anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 610first strand
Strand 2
A
567 571parallel
Strand 3
A
528 532parallel
Strand 4
A
628 631parallel
Strand 5
A
653 656parallel
Strand 6
A
675 676parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
196 208anti-parallel
Strand 3
B
178 182anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
196 208anti-parallel
Strand 3
B
215 224anti-parallel
Strand 4
B
134 139parallel
Strand 5
B
61 65parallel
Strand 6
B
302 307parallel
Strand 7
B
341 344parallel
Strand 8
B
417 420parallel
Strand 9
B
445 447parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 151first strand
Strand 2
B
154 158anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
192 193anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 357first strand
Strand 2
B
404 406anti-parallel
Strand 3
B
400 401anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
606 610first strand
Strand 2
B
567 571parallel
Strand 3
B
528 532parallel
Strand 4
B
628 631parallel
Strand 5
B
653 656parallel
Strand 6
B
675 676parallel
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