Analysis of interatomic Contacts of Structural Units in PDB entry:
7TMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TMV entry

There are 2 chains in PDB entry 7TMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 11LYS 169
B
 ASN 10GLY 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7TMV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 43Right-handed alpha
Helix 2
AA2
A
45 74Right-handed alpha
Helix 3
AA3
A
83 99Right-handed alpha
Helix 4
AA4
A
103 136Right-handed alpha
Helix 5
AA5
A
137 165Right-handed alpha
Helix 6
AA6
B
13 43Right-handed alpha
Helix 7
AA7
B
45 74Right-handed alpha
Helix 8
AA8
B
83 100Right-handed alpha
Helix 9
AA9
B
103 136Right-handed alpha
Helix 10
AB1
B
137 164Right-handed alpha
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There are no sheets in PDB entry 7TMV
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il