Analysis of interatomic Contacts of Structural Units in PDB entry:
7TN8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TN8 entry

There is 1 chain in PDB entry 7TN8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 16LYS 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7TN8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 34Right-handed alpha
Helix 2
AA2
A
35 44Right-handed alpha
Helix 3
AA3
A
57 61Right-handed 310
Helix 4
AA4
A
73 87Right-handed alpha
Helix 5
AA5
A
95 101Right-handed alpha
Helix 6
AA6
A
104 114Right-handed alpha
Helix 7
AA7
A
135 142Right-handed alpha
Helix 8
AA8
A
143 148Right-handed 310
Helix 9
AA9
A
162 167Right-handed alpha
Helix 10
AB1
A
173 178Right-handed alpha
Helix 11
AB2
A
190 193Right-handed 310
Helix 12
AB3
A
259 275Right-handed alpha
Helix 13
AB4
A
303 307Right-handed 310
Helix 14
AB5
A
309 322Right-handed alpha
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There are 3 sheets in PDB entry 7TN8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
19 25parallel
Strand 3
A
66 70parallel
Strand 4
A
92 93parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
292 300parallel
Strand 3
A
278 286anti-parallel
Strand 4
A
195 202anti-parallel
Strand 5
A
206 212anti-parallel
Strand 6
A
226 230anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
184 188anti-parallel
Strand 3
A
152 156anti-parallel
Strand 4
A
169 171anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il