Analysis of interatomic Contacts of Structural Units in PDB entry:
7TN9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TN9 entry

There are 22 chains in PDB entry 7TN9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 1VAL 116
T
SER 32ASN 312
S
SER 32GLU 292
U
SER 32ASN 312
R
ASP 1ILE 105
N
ASP 1LEU 103
F
ASP 1LYS 113
W
ILE 504HIS 613
Q
GLU 1VAL 116
M
VAL 2VAL 116
G
GLN 1SER 115
H
ILE 2LYS 108
P
ASP 1THR 101
O
VAL 2VAL 116
V
ILE 504HIS 613
X
ALA 507HIS 613
I
GLN 1THR 113
J
ILE 2ILE 107
C
GLU 1VAL 116
E
GLU 1VAL 116
B
ASP 1LYS 113
D
ASP 1LYS 113
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7TN9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
60 64Right-handed 310
Helix 2
AA2
T
71 74Right-handed 310
Helix 3
AA3
T
78 85Right-handed alpha
Helix 4
AA4
T
249 264Right-handed alpha
Helix 5
AA5
T
291 296Right-handed 310
Helix 6
AA6
S
59 61Right-handed 310
Helix 7
AA7
S
71 74Right-handed 310
Helix 8
AA8
S
78 85Right-handed alpha
Helix 9
AA9
S
191 196Right-handed alpha
Helix 10
AB1
S
249 261Right-handed alpha
Helix 11
AB2
U
71 74Right-handed 310
Helix 12
AB3
U
78 85Right-handed alpha
Helix 13
AB4
U
249 264Right-handed alpha
Helix 14
AB5
U
289 296Right-handed alpha
Helix 15
AB6
N
79 84Right-handed 310
Helix 16
AB7
W
538 541Right-handed 310
Helix 17
AB8
W
551 576Right-handed alpha
Helix 18
AB9
W
583 597Right-handed alpha
Helix 19
AC1
Q
87 91Right-handed 310
Helix 20
AC2
M
74 76Right-handed 310
Helix 21
AC3
M
87 91Right-handed 310
Helix 22
AC4
G
62 65Right-handed 310
Helix 23
AC5
G
87 91Right-handed 310
Helix 24
AC6
P
79 84Right-handed 310
Helix 25
AC7
O
87 91Right-handed 310
Helix 26
AC8
V
528 532Right-handed 310
Helix 27
AC9
V
538 542Right-handed 310
Helix 28
AD1
V
551 576Right-handed alpha
Helix 29
AD2
V
583 597Right-handed alpha
Helix 30
AD3
X
539 541Right-handed 310
Helix 31
AD4
X
551 576Right-handed alpha
Helix 32
AD5
X
583 597Right-handed alpha
Helix 33
AD6
I
62 65Right-handed 310
Helix 34
AD7
I
87 91Right-handed 310
Helix 35
AD8
C
60 64Right-handed 310
Helix 36
AD9
C
86 90Right-handed 310
Helix 37
AE1
E
73 75Right-handed 310
Helix 38
AE2
B
85 89Right-handed 310
Helix 39
AE3
D
85 89Right-handed 310
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There are 54 sheets in PDB entry 7TN9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 7first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
67 72anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 11first strand
Strand 2
A
112 115parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
57 58anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 11first strand
Strand 2
A
112 115parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
105 108anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
42 45first strand
Strand 2
T
35 39anti-parallel
Strand 3
T
177 185parallel
Strand 4
T
63 69anti-parallel
Strand 5
T
101 103parallel
Strand 6
W
516 520anti-parallel
Strand 7
W
543 547anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
42 45first strand
Strand 2
T
35 39anti-parallel
Strand 3
T
177 185parallel
Strand 4
T
159 162anti-parallel
Strand 5
T
165 167anti-parallel
Strand 6
T
96 98anti-parallel
Strand 7
W
580 581parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
86 89first strand
Strand 2
T
151 154anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
105 111first strand
Strand 2
T
135 144parallel
Strand 3
T
216 223parallel
Strand 4
T
231 237anti-parallel
Strand 5
T
240 243anti-parallel
Strand 6
T
273 279parallel
Strand 7
T
306 310anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
42 45first strand
Strand 2
S
36 39anti-parallel
Strand 3
S
177 185parallel
Strand 4
S
63 69anti-parallel
Strand 5
S
101 103parallel
Strand 6
V
516 519anti-parallel
Strand 7
V
544 547anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
42 45first strand
Strand 2
S
36 39anti-parallel
Strand 3
S
177 185parallel
Strand 4
S
159 162anti-parallel
Strand 5
S
165 167anti-parallel
Strand 6
S
96 98anti-parallel
Strand 7
V
580 581parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
86 89first strand
Strand 2
S
151 154anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
105 114first strand
Strand 2
S
135 144parallel
Strand 3
S
216 223parallel
Strand 4
S
231 235anti-parallel
Strand 5
S
240 243anti-parallel
Strand 6
S
273 275parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
42 45first strand
Strand 2
U
36 39anti-parallel
Strand 3
U
177 185parallel
Strand 4
U
63 69anti-parallel
Strand 5
U
101 103parallel
Strand 6
X
515 520anti-parallel
Strand 7
X
543 548anti-parallel
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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
42 45first strand
Strand 2
U
36 39anti-parallel
Strand 3
U
177 185parallel
Strand 4
U
159 162anti-parallel
Strand 5
U
165 167anti-parallel
Strand 6
U
96 98anti-parallel
Strand 7
X
580 581parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
86 89first strand
Strand 2
U
151 154anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
105 109first strand
Strand 2
U
135 144parallel
Strand 3
U
112 114parallel
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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
105 109first strand
Strand 2
U
135 144parallel
Strand 3
U
216 223parallel
Strand 4
U
231 235anti-parallel
Strand 5
U
240 243anti-parallel
Strand 6
U
273 279parallel
Strand 7
U
306 311anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
5 6first strand
Strand 2
R
19 24anti-parallel
Strand 3
R
70 75anti-parallel
Strand 4
R
62 65anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
10 12first strand
Strand 2
R
101 104parallel
Strand 3
R
85 90anti-parallel
Strand 4
R
33 38anti-parallel
Strand 5
R
45 49anti-parallel
Strand 6
R
53 54anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
10 12first strand
Strand 2
R
101 104parallel
Strand 3
R
85 90anti-parallel
Strand 4
R
96 97anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
4 6first strand
Strand 2
N
19 25anti-parallel
Strand 3
N
70 75anti-parallel
Strand 4
N
62 65anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
45 46first strand
Strand 2
N
33 38anti-parallel
Strand 3
N
85 90anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
4 6first strand
Strand 2
F
19 25anti-parallel
Strand 3
F
76 81anti-parallel
Strand 4
F
68 73anti-parallel
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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
10 12first strand
Strand 2
F
108 111parallel
Strand 3
F
91 96anti-parallel
Strand 4
F
39 44anti-parallel
Strand 5
F
51 55anti-parallel
Strand 6
F
59 60anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
30 31first strand
Strand 2
F
36 37anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
3 7first strand
Strand 2
Q
18 25anti-parallel
Strand 3
Q
78 83anti-parallel
Strand 4
Q
68 73anti-parallel
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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
58 60first strand
Strand 2
Q
45 51anti-parallel
Strand 3
Q
34 39anti-parallel
Strand 4
Q
92 98anti-parallel
Strand 5
Q
112 114anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
3 7first strand
Strand 2
M
17 25anti-parallel
Strand 3
M
78 84anti-parallel
Strand 4
M
68 73anti-parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
58 60first strand
Strand 2
M
45 51anti-parallel
Strand 3
M
34 39anti-parallel
Strand 4
M
92 98anti-parallel
Strand 5
M
112 114anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
3 7first strand
Strand 2
G
18 25anti-parallel
Strand 3
G
78 83anti-parallel
Strand 4
G
68 73anti-parallel
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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
10 12first strand
Strand 2
G
110 114parallel
Strand 3
G
92 97anti-parallel
Strand 4
G
34 39anti-parallel
Strand 5
G
45 51anti-parallel
Strand 6
G
58 60anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
4 6first strand
Strand 2
H
19 29anti-parallel
Strand 3
H
62 75anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 13first strand
Strand 2
H
104 107parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
45 48first strand
Strand 2
H
34 38anti-parallel
Strand 3
H
85 89anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
4 6first strand
Strand 2
P
19 25anti-parallel
Strand 3
P
70 75anti-parallel
Strand 4
P
62 65anti-parallel
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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
53 54first strand
Strand 2
P
45 49anti-parallel
Strand 3
P
33 38anti-parallel
Strand 4
P
85 90anti-parallel
Strand 5
P
96 97anti-parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
3 7first strand
Strand 2
O
18 25anti-parallel
Strand 3
O
78 83anti-parallel
Strand 4
O
68 73anti-parallel
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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
58 60first strand
Strand 2
O
45 51anti-parallel
Strand 3
O
34 39anti-parallel
Strand 4
O
92 98anti-parallel
Strand 5
O
112 114anti-parallel
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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
3 7first strand
Strand 2
I
19 25anti-parallel
Strand 3
I
78 83anti-parallel
Strand 4
I
68 73anti-parallel
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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
58 60first strand
Strand 2
I
44 51anti-parallel
Strand 3
I
34 40anti-parallel
Strand 4
I
92 97anti-parallel
Strand 5
I
110 112anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
4 6first strand
Strand 2
J
23 25anti-parallel
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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
45 48first strand
Strand 2
J
33 38anti-parallel
Strand 3
J
85 90anti-parallel
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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 7first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
67 72anti-parallel
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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
57 58first strand
Strand 2
C
44 51anti-parallel
Strand 3
C
34 40anti-parallel
Strand 4
C
91 98anti-parallel
Strand 5
C
105 108anti-parallel
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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
57 58first strand
Strand 2
C
44 51anti-parallel
Strand 3
C
34 40anti-parallel
Strand 4
C
91 98anti-parallel
Strand 5
C
112 114anti-parallel
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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
3 7first strand
Strand 2
E
18 25anti-parallel
Strand 3
E
77 82anti-parallel
Strand 4
E
67 72anti-parallel
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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
57 58first strand
Strand 2
E
45 51anti-parallel
Strand 3
E
34 39anti-parallel
Strand 4
E
92 97anti-parallel
Strand 5
E
107 108anti-parallel
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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
57 58first strand
Strand 2
E
45 51anti-parallel
Strand 3
E
34 39anti-parallel
Strand 4
E
92 97anti-parallel
Strand 5
E
112 113anti-parallel
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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4 6first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
76 81anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 12first strand
Strand 2
B
108 111parallel
Strand 3
B
90 96anti-parallel
Strand 4
B
39 44anti-parallel
Strand 5
B
51 55anti-parallel
Strand 6
B
59 60anti-parallel
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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
30 31first strand
Strand 2
B
36 37anti-parallel
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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
4 6first strand
Strand 2
D
19 25anti-parallel
Strand 3
D
76 81anti-parallel
Strand 4
D
68 73anti-parallel
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There are 6 strands in AF7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 13first strand
Strand 2
D
108 112parallel
Strand 3
D
91 96anti-parallel
Strand 4
D
39 44anti-parallel
Strand 5
D
51 55anti-parallel
Strand 6
D
59 60anti-parallel
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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 13first strand
Strand 2
D
108 112parallel
Strand 3
D
91 96anti-parallel
Strand 4
D
103 104anti-parallel
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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
30 31first strand
Strand 2
D
36 37anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il