Analysis of interatomic Contacts of Structural Units in PDB entry:
7TO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TO0 entry

There are 3 chains in PDB entry 7TO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 241GLU 922
B
 G 1 G 12
C
 C 13 C 24
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7TO0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
244 252Right-handed alpha
Helix 2
AA2
A
266 282Right-handed alpha
Helix 3
AA3
A
299 315Right-handed alpha
Helix 4
AA4
A
333 340Right-handed alpha
Helix 5
AA5
A
347 358Right-handed alpha
Helix 6
AA6
A
373 377Right-handed 310
Helix 7
AA7
A
381 396Right-handed alpha
Helix 8
AA8
A
419 434Right-handed alpha
Helix 9
AA9
A
445 450Right-handed alpha
Helix 10
AB1
A
469 488Right-handed alpha
Helix 11
AB2
A
493 497Right-handed 310
Helix 12
AB3
A
506 521Right-handed alpha
Helix 13
AB4
A
530 558Right-handed alpha
Helix 14
AB5
A
560 576Right-handed alpha
Helix 15
AB6
A
580 603Right-handed alpha
Helix 16
AB7
A
608 625Right-handed alpha
Helix 17
AB8
A
636 649Right-handed alpha
Helix 18
AB9
A
674 684Right-handed alpha
Helix 19
AC1
A
697 701Right-handed 310
Helix 20
AC2
A
720 729Right-handed alpha
Helix 21
AC3
A
744 769Right-handed alpha
Helix 22
AC4
A
772 794Right-handed alpha
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There are 6 sheets in PDB entry 7TO0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
369 371parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 322first strand
Strand 2
A
343 344parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 460first strand
Strand 2
A
737 741parallel
Strand 3
A
711 715parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 819first strand
Strand 2
A
807 810anti-parallel
Strand 3
A
892 895anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
831 832first strand
Strand 2
A
824 825anti-parallel
Strand 3
A
916 917parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
842 846first strand
Strand 2
A
858 864anti-parallel
Strand 3
A
874 878anti-parallel
Strand 4
A
883 887anti-parallel
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