Analysis of interatomic Contacts of Structural Units in PDB entry:
7TOC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TOC entry

There are 2 chains in PDB entry 7TOC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 42GLN 400
B
 VAL 42GLN 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7TOC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 71Right-handed 310
Helix 2
AA2
A
72 81Right-handed alpha
Helix 3
AA3
A
91 104Right-handed alpha
Helix 4
AA4
A
116 125Right-handed alpha
Helix 5
AA5
A
135 143Right-handed alpha
Helix 6
AA6
A
151 163Right-handed alpha
Helix 7
AA7
A
164 166Right-handed 310
Helix 8
AA8
A
177 182Right-handed alpha
Helix 9
AA9
A
182 187Right-handed alpha
Helix 10
AB1
A
204 214Right-handed alpha
Helix 11
AB2
A
231 243Right-handed alpha
Helix 12
AB3
A
252 266Right-handed alpha
Helix 13
AB4
A
269 286Right-handed alpha
Helix 14
AB5
A
289 296Right-handed alpha
Helix 15
AB6
A
298 304Right-handed alpha
Helix 16
AB7
A
304 313Right-handed alpha
Helix 17
AB8
A
313 320Right-handed alpha
Helix 18
AB9
A
322 353Right-handed alpha
Helix 19
AC1
A
354 365Right-handed alpha
Helix 20
AC2
A
368 382Right-handed alpha
Helix 21
AC3
A
383 395Right-handed alpha
Helix 22
AC4
A
396 400Right-handed 310
Helix 23
AC5
B
69 71Right-handed 310
Helix 24
AC6
B
72 80Right-handed alpha
Helix 25
AC7
B
91 105Right-handed alpha
Helix 26
AC8
B
116 125Right-handed alpha
Helix 27
AC9
B
135 143Right-handed alpha
Helix 28
AD1
B
151 163Right-handed alpha
Helix 29
AD2
B
164 166Right-handed 310
Helix 30
AD3
B
177 182Right-handed alpha
Helix 31
AD4
B
182 187Right-handed alpha
Helix 32
AD5
B
204 213Right-handed alpha
Helix 33
AD6
B
231 243Right-handed alpha
Helix 34
AD7
B
252 266Right-handed alpha
Helix 35
AD8
B
269 285Right-handed alpha
Helix 36
AD9
B
289 296Right-handed alpha
Helix 37
AE1
B
298 304Right-handed alpha
Helix 38
AE2
B
304 313Right-handed alpha
Helix 39
AE3
B
313 320Right-handed alpha
Helix 40
AE4
B
322 354Right-handed alpha
Helix 41
AE5
B
354 365Right-handed alpha
Helix 42
AE6
B
368 382Right-handed alpha
Helix 43
AE7
B
383 395Right-handed alpha
Helix 44
AE8
B
396 400Right-handed 310
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There are 2 sheets in PDB entry 7TOC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
61 67anti-parallel
Strand 3
A
247 250anti-parallel
Strand 4
A
220 226parallel
Strand 5
A
195 201anti-parallel
Strand 6
A
171 174parallel
Strand 7
A
145 148parallel
Strand 8
A
85 88parallel
Strand 9
A
108 111parallel
Strand 10
A
133 134parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
62 67anti-parallel
Strand 3
B
247 250anti-parallel
Strand 4
B
220 226parallel
Strand 5
B
195 201anti-parallel
Strand 6
B
171 174parallel
Strand 7
B
145 148parallel
Strand 8
B
85 88parallel
Strand 9
B
108 111parallel
Strand 10
B
133 134parallel
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