Analysis of interatomic Contacts of Structural Units in PDB entry:
7TPU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TPU entry

There is 1 chain in PDB entry 7TPU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13GLY 616
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7TPU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 36Right-handed alpha
Helix 2
AA2
A
48 52Right-handed 310
Helix 3
AA3
A
73 86Right-handed alpha
Helix 4
AA4
A
99 103Right-handed 310
Helix 5
AA5
A
125 127Right-handed 310
Helix 6
AA6
A
128 134Right-handed alpha
Helix 7
AA7
A
179 190Right-handed alpha
Helix 8
AA8
A
225 239Right-handed alpha
Helix 9
AA9
A
251 255Right-handed 310
Helix 10
AB1
A
283 303Right-handed alpha
Helix 11
AB2
A
342 344Right-handed 310
Helix 12
AB3
A
345 359Right-handed alpha
Helix 13
AB4
A
367 373Right-handed alpha
Helix 14
AB5
A
378 384Right-handed 310
Helix 15
AB6
A
385 391Right-handed alpha
Helix 16
AB7
A
397 402Right-handed alpha
Helix 17
AB8
A
403 406Right-handed 310
Helix 18
AB9
A
407 415Right-handed alpha
Helix 19
AC1
A
424 434Right-handed alpha
Helix 20
AC2
A
449 464Right-handed alpha
Helix 21
AC3
A
466 475Right-handed alpha
Helix 22
AC4
A
487 491Right-handed 310
Helix 23
AC5
A
519 521Right-handed 310
Helix 24
AC6
A
526 530Right-handed 310
Helix 25
AC7
A
539 547Right-handed alpha
Helix 26
AC8
A
593 603Right-handed alpha
Helix 27
AC9
A
603 612Right-handed alpha
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There are 8 sheets in PDB entry 7TPU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 21first strand
Strand 2
A
53 60anti-parallel
Strand 3
A
38 46anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 72first strand
Strand 2
A
104 110anti-parallel
Strand 3
A
90 97anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 123first strand
Strand 2
A
152 160anti-parallel
Strand 3
A
138 147anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
206 211anti-parallel
Strand 3
A
194 200anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 224first strand
Strand 2
A
256 262anti-parallel
Strand 3
A
242 249anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 275first strand
Strand 2
A
316 326anti-parallel
Strand 3
A
306 313anti-parallel
Strand 4
A
580 586anti-parallel
Strand 5
A
570 577anti-parallel
Strand 6
A
561 567anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 340first strand
Strand 2
A
536 538anti-parallel
Strand 3
A
482 483anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
503 504first strand
Strand 2
A
516 517anti-parallel
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