Analysis of interatomic Contacts of Structural Units in PDB entry:
7TQQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TQQ entry

There are 8 chains in PDB entry 7TQQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8GLY 234
B
 PRO 8GLY 234
C
 G 1 C 22
D
 G 1 C 22
E
 PRO 7GLY 234
F
 PRO 7GLY 234
G
 G 1 C 22
H
 G 1 C 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 7TQQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 28Right-handed 310
Helix 2
AA2
A
41 46Right-handed alpha
Helix 3
AA3
A
78 86Right-handed alpha
Helix 4
AA4
A
88 95Right-handed alpha
Helix 5
AA5
A
101 114Right-handed alpha
Helix 6
AA6
A
125 128Right-handed 310
Helix 7
AA7
A
129 141Right-handed alpha
Helix 8
AA8
A
155 166Right-handed alpha
Helix 9
AA9
A
178 188Right-handed alpha
Helix 10
AB1
A
196 209Right-handed alpha
Helix 11
AB2
A
211 223Right-handed alpha
Helix 12
AB3
A
227 229Right-handed 310
Helix 13
AB4
B
24 28Right-handed 310
Helix 14
AB5
B
41 46Right-handed alpha
Helix 15
AB6
B
78 86Right-handed alpha
Helix 16
AB7
B
88 95Right-handed alpha
Helix 17
AB8
B
101 113Right-handed alpha
Helix 18
AB9
B
129 141Right-handed alpha
Helix 19
AC1
B
155 165Right-handed alpha
Helix 20
AC2
B
178 188Right-handed alpha
Helix 21
AC3
B
196 209Right-handed alpha
Helix 22
AC4
B
211 223Right-handed alpha
Helix 23
AC5
B
227 229Right-handed 310
Helix 24
AC6
E
24 28Right-handed 310
Helix 25
AC7
E
42 44Right-handed 310
Helix 26
AC8
E
78 86Right-handed alpha
Helix 27
AC9
E
88 95Right-handed alpha
Helix 28
AD1
E
101 114Right-handed alpha
Helix 29
AD2
E
129 141Right-handed alpha
Helix 30
AD3
E
155 164Right-handed alpha
Helix 31
AD4
E
178 188Right-handed alpha
Helix 32
AD5
E
196 209Right-handed alpha
Helix 33
AD6
E
211 223Right-handed alpha
Helix 34
AD7
E
227 229Right-handed 310
Helix 35
AD8
F
24 28Right-handed 310
Helix 36
AD9
F
41 46Right-handed alpha
Helix 37
AE1
F
78 86Right-handed alpha
Helix 38
AE2
F
88 95Right-handed alpha
Helix 39
AE3
F
101 114Right-handed alpha
Helix 40
AE4
F
129 141Right-handed alpha
Helix 41
AE5
F
155 166Right-handed alpha
Helix 42
AE6
F
178 188Right-handed alpha
Helix 43
AE7
F
196 209Right-handed alpha
Helix 44
AE8
F
211 223Right-handed alpha
Helix 45
AE9
F
227 229Right-handed 310
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There are 2 sheets in PDB entry 7TQQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
151 154anti-parallel
Strand 3
A
119 123parallel
Strand 4
A
13 21parallel
Strand 5
A
31 40anti-parallel
Strand 6
A
65 70anti-parallel
Strand 7
B
65 70anti-parallel
Strand 8
B
31 40anti-parallel
Strand 9
B
13 21anti-parallel
Strand 10
B
119 123parallel
Strand 11
B
151 154parallel
Strand 12
B
224 225anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
224 225first strand
Strand 2
E
151 154anti-parallel
Strand 3
E
119 123parallel
Strand 4
E
13 21parallel
Strand 5
E
31 40anti-parallel
Strand 6
E
65 70anti-parallel
Strand 7
F
65 70anti-parallel
Strand 8
F
31 40anti-parallel
Strand 9
F
13 21anti-parallel
Strand 10
F
119 123parallel
Strand 11
F
151 154parallel
Strand 12
F
224 225anti-parallel
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