Analysis of interatomic Contacts of Structural Units in PDB entry:
7TQR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7TQR entry

There are 2 chains in PDB entry 7TQR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0GLY 140
A
 ASP 144PRO 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7TQR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 19Right-handed alpha
Helix 2
AA2
A
27 50Right-handed alpha
Helix 3
AA3
A
64 83Right-handed alpha
Helix 4
AA4
A
91 107Right-handed alpha
Helix 5
AA5
A
114 128Right-handed alpha
Helix 6
AA6
A
144 156Right-handed alpha
Helix 7
AA7
A
170 177Right-handed alpha
Helix 8
AA8
A
187 194Right-handed alpha
Helix 9
AA9
A
196 228Right-handed alpha
Helix 10
AB1
A
231 235Right-handed 310
Helix 11
AB2
A
236 242Right-handed alpha
Helix 12
AB3
A
245 260Right-handed alpha
Helix 13
AB4
A
262 272Right-handed alpha
Helix 14
AB5
A
276 281Right-handed alpha
Helix 15
AB6
A
281 304Right-handed alpha
Helix 16
AB7
A
326 355Right-handed alpha
Helix 17
AB8
A
356 361Right-handed alpha
Helix 18
AB9
A
363 367Right-handed 310
Helix 19
AC1
A
376 394Right-handed alpha
Helix 20
AC2
A
396 400Right-handed 310
Helix 21
AC3
A
414 445Right-handed alpha
Helix 22
AC4
A
452 466Right-handed alpha
Helix 23
AC5
A
474 488Right-handed alpha
Helix 24
AC6
A
489 495Right-handed alpha
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There are 4 sheets in PDB entry 7TQR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 3first strand
Strand 2
A
23 25parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
134 136anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 131first strand
Strand 2
A
160 163anti-parallel
Strand 3
A
166 169anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
318 319anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il